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休眠核糖体执行的应激反应:结构概述。

Stress response as implemented by hibernating ribosomes: a structural overview.

机构信息

Structural Biology, Weizmann Institute. Rehovot, Israel.

Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO, USA.

出版信息

FEBS J. 2019 Sep;286(18):3558-3565. doi: 10.1111/febs.14968. Epub 2019 Jul 15.

Abstract

Protein synthesis is one of the most energy demanding cellular processes. The ability to regulate protein synthesis is essential for cells under normal as well as stress conditions, such as nutrient deficiencies. One mechanism for protein synthesis suppression is the dimerization of ribosomes into hibernation complexes. In most cells, this process is promoted by the hibernating promoting factor (HPF) and in a small group of Gram-negative bacteria (γ-proteobacteria), the dimer formation is induced by a shorter version of HPF (HPF ) and by an additional protein, the ribosome modulation factor. In most bacteria, the product of this process is the 100S ribosome complex. Recent advances in cryogenic electron microscopy methods resulted in an abundance of detailed structures of near atomic resolutions 100S complexes that allow for a better understanding of the dimerization process and the way it inhibits protein synthesis. As ribosomal dimerization is vital for cell survival, this process is an attractive target for the development of novel antimicrobial substances that might inhibit or stabilize the complex formation. As different dimerization processes exist among bacteria, including pathogens, this process may provide the basis for species-specific design of antimicrobial agents. Here, we review in detail the various dimerization mechanisms and discuss how they affect the overall dimer structures of the bacterial ribosomes.

摘要

蛋白质合成是细胞中最耗能的过程之一。在正常和应激条件下,如营养缺乏时,调节蛋白质合成的能力对细胞至关重要。一种抑制蛋白质合成的机制是核糖体二聚化成休眠复合物。在大多数细胞中,这个过程是由休眠促进因子(HPF)促进的,而在一小部分革兰氏阴性菌(γ-变形菌)中,二聚体的形成是由 HPF 的较短版本(HPF )和另一种蛋白质核糖体调节因子诱导的。在大多数细菌中,这个过程的产物是 100S 核糖体复合物。低温电子显微镜方法的最新进展产生了大量详细的近原子分辨率 100S 复合物结构,这使得我们能够更好地理解二聚化过程及其抑制蛋白质合成的方式。由于核糖体二聚化对于细胞存活至关重要,因此这个过程是开发新型抗菌物质的有吸引力的目标,这些物质可能抑制或稳定复合物的形成。由于不同的细菌,包括病原体,存在不同的二聚化过程,因此这个过程可能为针对特定物种的抗菌剂设计提供基础。在这里,我们详细回顾了各种二聚化机制,并讨论了它们如何影响细菌核糖体的整体二聚体结构。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f350/6771491/ff1961540825/FEBS-286-3558-g001.jpg

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