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随机特质群落聚类方法揭示群落组装中一致的环境阈值。

A Randomized Trait Community Clustering approach to unveil consistent environmental thresholds in community assembly.

机构信息

Integrative Freshwater Ecology Group Centre for Advanced Studies of Blanes (CEAB-CSIC), Spanish Council for Scientific Research, Accés Cala St. Francesc 14, E-17300, Blanes, Spain.

Departamento de Matemática Aplicada, Universidad Politécnica de Madrid, Av. Juan de Herrera, 6, E-28040, Madrid, Spain.

出版信息

ISME J. 2019 Nov;13(11):2681-2689. doi: 10.1038/s41396-019-0454-4. Epub 2019 Jun 26.

Abstract

Similarities and differences of phenotypes within local co-occurring species hold the key to inferring the contribution of stochastic or deterministic processes in community assembly. Developing both phylogenetic-based and trait-based quantitative methods to unravel these processes is a major aim in community ecology. We developed a trait-based approach that: (i) assesses if a community trait clustering pattern is related to increasing environmental constraints along a gradient; and (ii) determines quantitative thresholds for an environmental variable along a gradient to interpret changes in prevailing community assembly drivers. We used a regional set of natural shallow saline ponds covering a wide salinity gradient (0.1-40% w/v). We identify a consistent discrete salinity threshold (ca. 5%) for microbial community assembly drivers. Above 5% salinity a strong environmental filtering prevailed as an assembly force, whereas a combination of biotic and abiotic factors dominated at lower salinities. This method provides a conceptual approach to identify consistent environmental thresholds in community assembly and enables quantitative predictions for the ecological impact of environmental changes.

摘要

在本地共存物种中,表型的相似性和差异是推断群落组装中随机或确定性过程贡献的关键。开发基于系统发育和基于特征的定量方法来揭示这些过程是群落生态学的主要目标。我们开发了一种基于特征的方法,该方法:(i)评估群落特征聚类模式是否与沿梯度的环境约束增加有关;(ii)确定沿梯度的环境变量的定量阈值,以解释主要群落组装驱动因素的变化。我们使用了一组涵盖广泛盐度梯度(0.1-40% w/v)的区域性自然浅层盐水池塘。我们确定了微生物群落组装驱动因素的一个一致的离散盐度阈值(约 5%)。盐度高于 5%时,强烈的环境过滤成为主要的组装力量,而在较低盐度下,生物和非生物因素共同起作用。该方法提供了一种识别群落组装中一致环境阈值的概念方法,并能够对环境变化的生态影响进行定量预测。

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