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古老酶的新启示——来自非洲脱硫弧菌和嗜酸热硫化叶菌的丙酮酸合酶的体外 CO 固定。

New light on ancient enzymes - in vitro CO Fixation by Pyruvate Synthase of Desulfovibrio africanus and Sulfolobus acidocaldarius.

机构信息

Hochschule Biberach, University of Applied Science, Biberach, Germany.

Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg, Germany.

出版信息

FEBS J. 2019 Nov;286(22):4494-4508. doi: 10.1111/febs.14981. Epub 2019 Jul 19.

Abstract

Two variants of the enzyme family pyruvate:ferredoxin oxidoreductase (PFOR), derived from the anaerobic sulfate-reducing bacterium Desulfovibrio africanus and the extremophilic crenarchaeon Sulfolobus acidocaldarius, respectively, were evaluated for their capacity to fixate CO in vitro. PFOR reversibly catalyzes the conversion of acetyl-CoA and CO to pyruvate using ferredoxin as redox partner. The oxidative decarboxylation of pyruvate is thermodynamically strongly favored, and most previous studies only considered the oxidative direction of the enzyme. To assay the pyruvate synthase function of PFOR during reductive carboxylation of acetyl-CoA is more challenging and requires to maintain the reaction far from equilibrium. For this purpose, a biochemical assay was established where low-potential electrons were introduced by photochemical reduction of EDTA/deazaflavin and the generated pyruvate was trapped by chemical derivatization with semicarbazide. The product of CO fixation could be detected as pyruvate semicarbazone by HPLC-MS. In a combinatorial approach, both PFORs were tested with ferredoxins from different sources. The pyruvate semicarbazone product could be detected with low-potential ferredoxins of the green sulfur bacterium Chlorobium tepidum and of S. acidocaldarius whereas CO fixation was not supported by the native ferredoxin of D. africanus. Methylviologen as an artificial electron carrier also allowed CO fixation. For both enzymes, the results are the first demonstration of CO fixation in vitro. Both enzymes exhibited high stability in the presence of oxygen during purification and storage. In conclusion, the employed PFOR enzymes in combination with non-native ferredoxin cofactors might be promising candidates for further incorporation in biocatalytic CO conversion. ENZYMES: EC1.2.7.1. Pyruvate:Ferredoxin Oxidoreductase.

摘要

两种来自厌氧硫酸盐还原菌脱硫弧菌和极端嗜热古菌嗜酸热硫化叶菌的酶家族丙酮酸

铁氧还蛋白氧化还原酶(PFOR)变体分别被评估为其在体外固定 CO 的能力。PFOR 可逆地催化乙酰辅酶 A 和 CO 转化为丙酮酸,使用铁氧还蛋白作为氧化还原伴侣。丙酮酸的氧化脱羧在热力学上是非常有利的,大多数先前的研究只考虑了酶的氧化方向。为了在乙酰辅酶 A 的还原羧化过程中检测 PFOR 的丙酮酸合酶功能,更具挑战性,并且需要使反应远离平衡。为此,建立了一种生化测定方法,其中通过 EDTA/去甲黄素的光化学还原引入低电位电子,并用半卡巴肼化学衍生化捕获生成的丙酮酸。通过 HPLC-MS 可以检测到 CO 固定的产物作为丙酮酸缩氨脲。在组合方法中,两种 PFOR 均与来自不同来源的铁氧还蛋白一起进行了测试。可以用绿硫细菌 Chlorobium tepidum 和 S. acidocaldarius 的低电位铁氧还蛋白检测到丙酮酸缩氨脲产物,而来自 D. africanus 的天然铁氧还蛋白则不支持 CO 固定。作为人工电子载体的甲基紫精也允许 CO 固定。对于两种酶,结果都是首次在体外证明 CO 固定。在纯化和储存过程中,两种酶在存在氧气的情况下都表现出很高的稳定性。总之,所使用的 PFOR 酶与非天然铁氧还蛋白辅因子结合,可能是进一步纳入生物催化 CO 转化的有前途的候选物。酶:EC1.2.7.1. 丙酮酸:铁氧还蛋白氧化还原酶。

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