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本文引用的文献

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Engineering of Saccharomyces cerevisiae for the efficient co-utilization of glucose and xylose.工程化酿酒酵母以实现葡萄糖和木糖的高效共利用。
FEMS Yeast Res. 2017 Jun 1;17(4). doi: 10.1093/femsyr/fox034.
2
Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation.控制AFEX预处理玉米秸秆和柳枝稷水解过程中的微生物污染:对水解产物组成、微生物反应和发酵的影响。
Biotechnol Biofuels. 2015 Nov 14;8:180. doi: 10.1186/s13068-015-0356-2. eCollection 2015.
3
Simultaneous utilization of glucose and xylose via novel mechanisms in engineered Escherichia coli.工程化大肠杆菌中通过新机制同时利用葡萄糖和木糖。
Metab Eng. 2015 Jul;30:141-148. doi: 10.1016/j.ymben.2015.05.002. Epub 2015 Jun 2.
4
Improving a recombinant Zymomonas mobilis strain 8b through continuous adaptation on dilute acid pretreated corn stover hydrolysate.通过在稀酸预处理玉米秸秆水解物上连续适应,提高重组运动发酵单胞菌 8b 菌株。
Biotechnol Biofuels. 2015 Mar 31;8:55. doi: 10.1186/s13068-015-0233-z. eCollection 2015.
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Computational methods in metabolic engineering for strain design.用于菌株设计的代谢工程中的计算方法。
Curr Opin Biotechnol. 2015 Aug;34:135-41. doi: 10.1016/j.copbio.2014.12.019. Epub 2015 Jan 8.
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Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover.用于对AFEX预处理玉米秸秆中的木糖进行厌氧发酵的耐木质纤维素水解产物酿酒酵母菌株的工程构建及两阶段进化
PLoS One. 2014 Sep 15;9(9):e107499. doi: 10.1371/journal.pone.0107499. eCollection 2014.
7
Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification.氨预处理木质纤维素衍生的芳香族抑制剂通过激活控制抑制剂外排和解毒的调控回路来抑制细菌发酵生成乙醇。
Front Microbiol. 2014 Aug 13;5:402. doi: 10.3389/fmicb.2014.00402. eCollection 2014.
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Novel approach to engineer strains for simultaneous sugar utilization.新型工程菌株用于同时利用糖。
Metab Eng. 2013 Nov;20:63-72. doi: 10.1016/j.ymben.2013.08.003. Epub 2013 Aug 26.
9
Modification of glucose import capacity in Escherichia coli: physiologic consequences and utility for improving DNA vaccine production.大肠杆菌葡萄糖摄取能力的改造:生理后果及其在提高 DNA 疫苗生产中的应用。
Microb Cell Fact. 2013 May 2;12:42. doi: 10.1186/1475-2859-12-42.
10
RELATCH: relative optimality in metabolic networks explains robust metabolic and regulatory responses to perturbations.再锁:代谢网络中的相对最优性解释了对干扰的稳健代谢和调节响应。
Genome Biol. 2012 Jul 5;13(9):R78. doi: 10.1186/gb-2012-13-9-r78.

大肠杆菌的系统代谢工程提高了木质纤维素衍生糖的共转化。

Systems Metabolic Engineering of Escherichia coli Improves Coconversion of Lignocellulose-Derived Sugars.

机构信息

US Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI, 53711, USA.

Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Dr, Madison, WI, 53711, USA.

出版信息

Biotechnol J. 2019 Sep;14(9):e1800441. doi: 10.1002/biot.201800441. Epub 2019 Aug 5.

DOI:10.1002/biot.201800441
PMID:31297978
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6718303/
Abstract

Currently, microbial conversion of lignocellulose-derived glucose and xylose to biofuels is hindered by the fact that most microbes (including Escherichia coli [E. coli], Saccharomyces cerevisiae, and Zymomonas mobilis) preferentially consume glucose first and consume xylose slowly after glucose is depleted in lignocellulosic hydrolysates. In this study, E. coli strains are developed that simultaneously utilize glucose and xylose in lignocellulosic biomass hydrolysate using genome-scale models and adaptive laboratory evolution. E. coli strains are designed and constructed that coutilize glucose and xylose and adaptively evolve them to improve glucose and xylose utilization. Whole-genome resequencing of the evolved strains find relevant mutations in metabolic and regulatory genes and the mutations' involvement in sugar coutilization is investigated. The developed strains show significantly improved coconversion of sugars in lignocellulosic biomass hydrolysates and provide a promising platform for producing next-generation biofuels.

摘要

目前,微生物将木质纤维素衍生的葡萄糖和木糖转化为生物燃料受到阻碍,因为大多数微生物(包括大肠杆菌[E. coli]、酿酒酵母和运动发酵单胞菌)优先消耗葡萄糖,并且在木质纤维素水解物中葡萄糖耗尽后缓慢消耗木糖。在这项研究中,使用基因组规模模型和适应性实验室进化,开发了能够同时利用木质纤维素生物质水解物中的葡萄糖和木糖的大肠杆菌菌株。设计和构建了共利用葡萄糖和木糖的大肠杆菌菌株,并对其进行适应性进化以提高葡萄糖和木糖的利用效率。对进化菌株的全基因组重测序发现了代谢和调节基因中的相关突变,并研究了这些突变在糖共利用中的作用。开发的菌株在木质纤维素生物质水解物中的糖共转化中表现出显著提高,为生产下一代生物燃料提供了有前景的平台。