Norwegian Institute for Water Research (NIVA), Oslo, Norway.
Norwegian Veterinary Institute, Oslo, Norway.
PLoS One. 2019 Jul 12;14(7):e0219700. doi: 10.1371/journal.pone.0219700. eCollection 2019.
The ability to detect founding populations of invasive species or rare species with low number of individuals is important for aquatic ecosystem management. Traditional approaches use historical data, knowledge of the species' ecology and time-consuming surveys. Within the past decade, environmental DNA (eDNA) has emerged as a powerful additional tracking tool. While much work has been done with animals, comparatively very little has been done with aquatic plants. Here we investigated the transportation and seasonal changes in eDNA concentrations for an invasive aquatic species, Elodea canadensis, in Norway. A specific probe assay was developed using chloroplast DNA to study the fate of the targeted eDNA through space and time. The spatial study used a known source of Elodea canadensis within Lake Nordbytjern 400 m away from the lake outlet flowing into the stream Tveia. The rate of disappearance of E. canadensis eDNA was an order of magnitude loss over about 230 m in the lake and 1550 m in the stream. The time series study was performed monthly from May to October in lake Steinsfjorden harbouring E. canadensis, showing that eDNA concentrations varied by up to three orders of magnitude, peaking during fall. In both studies, the presence of suspended clay or turbidity for some samples did not hamper eDNA analysis. This study shows how efficient eDNA tools may be for tracking aquatic plants in the environment and provides key spatial and temporal information on the fate of eDNA.
检测入侵物种或个体数量较少的稀有物种的创始种群的能力对于水生生态系统管理非常重要。传统方法使用历史数据、物种生态学知识和耗时的调查。在过去的十年中,环境 DNA (eDNA) 已成为一种强大的跟踪工具。虽然已经对动物进行了大量研究,但对水生植物的研究相对较少。在这里,我们研究了挪威一种入侵水生物种加拿大一枝黄花的 eDNA 浓度的运输和季节性变化。使用叶绿体 DNA 开发了一种特定的探针检测方法,以研究目标 eDNA 通过空间和时间的命运。空间研究使用了一个已知的加拿大一枝黄花来源,位于距离流出湖泊进入溪流特维亚的湖泊出口 400 米处的 Nordbytjern 湖中。在湖中,eDNA 消失的速度约为 230 米,在溪流中约为 1550 米,eDNA 的消失速度为数量级损失。时间序列研究在 5 月至 10 月期间每月在容纳加拿大一枝黄花的 Steinfjorden 湖中进行,结果表明 eDNA 浓度变化高达三个数量级,秋季达到峰值。在这两项研究中,一些样本中悬浮粘土或浑浊度的存在并没有妨碍 eDNA 分析。这项研究表明,eDNA 工具在跟踪环境中的水生植物方面是多么有效,并提供了有关 eDNA 命运的关键时空信息。