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双硫离子与取代甲烷的亲核取代反应与消除反应:通过立体定向第一性原理动力学和过渡态理论探索手性选择性

Nucleophilic substitution vs elimination reaction of bisulfide ions with substituted methanes: exploration of chiral selectivity by stereodirectional first-principles dynamics and transition state theory.

作者信息

Rezende Marcos Vinícius C S, Coutinho Nayara D, Palazzetti Federico, Lombardi Andrea, Carvalho-Silva Valter Henrique

机构信息

Grupo de Química Teórica e Estrutural de Anápolis, Campus de Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás, Anápolis, Brazil.

Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy.

出版信息

J Mol Model. 2019 Jul 17;25(8):227. doi: 10.1007/s00894-019-4126-0.

DOI:10.1007/s00894-019-4126-0
PMID:31317347
Abstract

Control of molecular orientation is emerging as crucial for the characterization of the stereodynamics of kinetics processes beyond structural stereochemistry. The special role played in chiral discrimination phenomena has been particularly emphasized by Aquilanti and collaborators after their extensive probes of experimental control of molecular alignment and orientation. In this work, the manifestation of the Aquilanti mechanism has been demonstrated for the first time in first-principles molecular dynamics simulations: stationary points characterized on potential energy surfaces have been calculated for the study of chemical reactions occurring between the bisulfide anion HS and oriented prototypical chiral molecules CHFXY (where X = CH or CN and Y = Cl or I). The important reaction channels are those corresponding to bimolecular nucleophilic substitution (S2) and to bimolecular elimination (E2): their relative role has been assessed and alternative pathways due to the mirror forms of the oriented chiral molecule are revealed by the different reactivity of the two enantiomers of CHFCNI in S2 reaction.

摘要

对分子取向的控制正成为表征超越结构立体化学的动力学过程立体动力学的关键。在Aquilanti及其合作者对分子排列和取向的实验控制进行广泛探究之后,特别强调了其在手性识别现象中所起的特殊作用。在这项工作中,首次在第一性原理分子动力学模拟中证明了Aquilanti机制的表现:为研究硫氢根阴离子HS与取向的典型手性分子CHFXY(其中X = CH或CN,Y = Cl或I)之间发生的化学反应,计算了势能面上的驻点。重要的反应通道是那些对应于双分子亲核取代(S2)和双分子消除(E2)的通道:评估了它们的相对作用,并且通过CHFCNI的两种对映体在S2反应中的不同反应性揭示了由于取向手性分子的镜像形式导致的替代途径。

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