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免疫球蛋白重链增强子中体外蛋白质结合位点的体内功能分析。

In vivo functional analysis of in vitro protein binding sites in the immunoglobulin heavy chain enhancer.

作者信息

Tsao B P, Wang X F, Peterson C L, Calame K

机构信息

Department of Biological Chemistry, UCLA School of Medicine 90024.

出版信息

Nucleic Acids Res. 1988 Apr 25;16(8):3239-53. doi: 10.1093/nar/16.8.3239.

DOI:10.1093/nar/16.8.3239
PMID:3131736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC336491/
Abstract

We have systematically investigated the functional role of protein binding sites within the mouse immunoglobulin heavy chain enhancer which we previously identified by in vitro binding studies (1,2). Each binding site was deleted, mutant enhancers were cloned 3' of the chloramphenicol acetyl transferase gene in the vector pA10CAT2 and transfected into plasmacytoma cells. We demonstrate that the newly identified site E, located at 324-338 bp, is important for enhancer function; previously identified sites B(uE1), Cl(uE2), C2(uE3) and C3 were also shown to be important for enhancer activity. Sites A and D are not required for IgH enhancer function, as assayed by our methods. Thus, including the octamer site, six protein binding sites which bind at least six different proteins are important for enhancer function in vivo.

摘要

我们已经系统地研究了小鼠免疫球蛋白重链增强子内蛋白质结合位点的功能作用,这些位点是我们之前通过体外结合研究鉴定出来的(1,2)。每个结合位点都被删除,将突变的增强子克隆到载体pA10CAT2中氯霉素乙酰转移酶基因的3'端,并转染到浆细胞瘤细胞中。我们证明,新鉴定出的位于324 - 338 bp的位点E对增强子功能很重要;之前鉴定出的位点B(uE1)、C1(uE2)、C2(uE3)和C3也被证明对增强子活性很重要。通过我们的方法检测,位点A和D对于IgH增强子功能不是必需的。因此,包括八聚体位点在内,六个结合至少六种不同蛋白质的蛋白质结合位点对于体内增强子功能很重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3973/336491/1ae323c77813/nar00151-0128-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3973/336491/1ae323c77813/nar00151-0128-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3973/336491/1ae323c77813/nar00151-0128-a.jpg

相似文献

1
In vivo functional analysis of in vitro protein binding sites in the immunoglobulin heavy chain enhancer.免疫球蛋白重链增强子中体外蛋白质结合位点的体内功能分析。
Nucleic Acids Res. 1988 Apr 25;16(8):3239-53. doi: 10.1093/nar/16.8.3239.
2
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ETS-mediated cooperation between basic helix-loop-helix motifs of the immunoglobulin mu heavy-chain gene enhancer.免疫球蛋白μ重链基因增强子的碱性螺旋-环-螺旋基序之间由ETS介导的合作。
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本文引用的文献

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Expression and regulation of immunoglobulin heavy chain gene transfected into lymphoid cells.转染至淋巴细胞中的免疫球蛋白重链基因的表达与调控
EMBO J. 1983;2(8):1373-8. doi: 10.1002/j.1460-2075.1983.tb01594.x.
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Recombinant genomes which express chloramphenicol acetyltransferase in mammalian cells.在哺乳动物细胞中表达氯霉素乙酰转移酶的重组基因组。
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转录激活因子TFE3的缺失会损害体内B细胞的激活。
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IGH minisatellite suppression of USF-binding-site- and E mu-mediated transcriptional activation of the adenovirus major late promoter.免疫球蛋白重链微卫星对腺病毒主要晚期启动子的USF结合位点和Eμ介导的转录激活的抑制作用。
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Vectors for the expression of PCR-amplified immunoglobulin variable domains with human constant regions.用于表达具有人恒定区的PCR扩增免疫球蛋白可变结构域的载体。
Nucleic Acids Res. 1993 Jun 25;21(12):2921-9. doi: 10.1093/nar/21.12.2921.
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Yin-yang 1 activates the c-myc promoter.阴阳1激活c-myc启动子。
Mol Cell Biol. 1993 Dec;13(12):7487-95. doi: 10.1128/mcb.13.12.7487-7495.1993.
7
E2A expression, nuclear localization, and in vivo formation of DNA- and non-DNA-binding species during B-cell development.B细胞发育过程中E2A的表达、核定位以及DNA结合和非DNA结合物种的体内形成。
Mol Cell Biol. 1993 Dec;13(12):7321-33. doi: 10.1128/mcb.13.12.7321-7333.1993.
8
Pan/E2A expression precedes immunoglobulin heavy-chain expression during B lymphopoiesis in nontransformed cells, and Pan/E2A proteins are not detected in myeloid cells.在未转化细胞的B淋巴细胞生成过程中,Pan/E2A的表达先于免疫球蛋白重链的表达,并且在髓系细胞中未检测到Pan/E2A蛋白。
Mol Cell Biol. 1994 Jun;14(6):4087-96. doi: 10.1128/mcb.14.6.4087-4096.1994.
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Multiple forms of C/EBP beta bind the EFII enhancer sequence in the Rous sarcoma virus long terminal repeat.多种形式的C/EBPβ结合劳氏肉瘤病毒长末端重复序列中的EFII增强子序列。
Mol Cell Biol. 1994 Jul;14(7):4855-71. doi: 10.1128/mcb.14.7.4855-4871.1994.
10
The basic helix-loop-helix-zipper domain of TFE3 mediates enhancer-promoter interaction.TFE3的基本螺旋-环-螺旋-拉链结构域介导增强子与启动子的相互作用。
Mol Cell Biol. 1994 Dec;14(12):7704-16. doi: 10.1128/mcb.14.12.7704-7716.1994.
Proc Natl Acad Sci U S A. 1984 May;81(9):2650-4. doi: 10.1073/pnas.81.9.2650.
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A lymphocyte-specific cellular enhancer is located downstream of the joining region in immunoglobulin heavy chain genes.一种淋巴细胞特异性细胞增强子位于免疫球蛋白重链基因连接区的下游。
Cell. 1983 Jul;33(3):729-40. doi: 10.1016/0092-8674(83)90015-6.
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A tissue-specific transcription enhancer element is located in the major intron of a rearranged immunoglobulin heavy chain gene.一种组织特异性转录增强子元件位于重排的免疫球蛋白重链基因的主要内含子中。
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Immunoglobulin gene expression in transformed lymphoid cells.转化淋巴细胞中的免疫球蛋白基因表达。
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Correct transcription of an immunoglobulin kappa gene requires an upstream fragment containing conserved sequence elements.免疫球蛋白κ基因的正确转录需要一个包含保守序列元件的上游片段。
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Expression of a preproinsulin-beta-galactosidase gene fusion in mammalian cells.前胰岛素原 - β - 半乳糖苷酶基因融合体在哺乳动物细胞中的表达。
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Expression and regulation of Escherichia coli lacZ gene fusions in mammalian cells.大肠杆菌lacZ基因融合体在哺乳动物细胞中的表达与调控
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Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
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