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时间延迟对 DNA 损伤反应中 p53 振荡的贡献。

Contribution of time delays to p53 oscillation in DNA damage response.

机构信息

Shanghai Institute of Applied Mathematics and Mechanics, Shanghai University, Shanghai 200072, People's Republic of China.

Department of Mathematics, Yunnan Normal University, Kunming, Yunnan 650500, People's Republic of China.

出版信息

IET Syst Biol. 2019 Aug;13(4):180-185. doi: 10.1049/iet-syb.2019.0006.

Abstract

Although the oscillatory dynamics of the p53 network have been extensively studied, the understanding of the mechanism of delay-induced oscillations is still limited. In this paper, a comprehensive mathematical model of p53 network is studied, which contains two delayed negative feedback loops. By studying the model with and without explicit delays, the results indicate that the time delay of Mdm2 protein synthesis can well control the pulse shape but cannot induce p53 oscillation alone, while the time delay required for Wip1 protein synthesis induces a Hopf bifurcation to drive p53 oscillation. In addition, the synergy of the two delays will cause the p53 network to oscillate in advance, indicating that p53 begins the repair process earlier in the damaged cell. Furthermore, the stability and bifurcation of the model are addressed, which may highlight the role of time delay in p53 oscillations.

摘要

虽然 p53 网络的振荡动力学已经得到了广泛的研究,但对延迟诱导振荡的机制的理解仍然有限。在本文中,研究了一个包含两个延迟负反馈回路的 p53 网络的综合数学模型。通过对具有和不具有显式延迟的模型进行研究,结果表明,Mdm2 蛋白合成的时间延迟可以很好地控制脉冲形状,但不能单独诱导 p53 振荡,而 Wip1 蛋白合成所需的时间延迟则会诱导 Hopf 分岔来驱动 p53 振荡。此外,两个延迟的协同作用会导致 p53 网络提前振荡,这表明受损细胞中的 p53 更早开始修复过程。此外,还研究了模型的稳定性和分岔,这可能突出了时间延迟在 p53 振荡中的作用。

相似文献

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Oscillatory Dynamics of p53-Mdm2 Circuit in Response to DNA Damage Caused by Ionizing Radiation.离子辐射导致 DNA 损伤时 p53-Mdm2 回路的振荡动力学。
IEEE/ACM Trans Comput Biol Bioinform. 2020 Sep-Oct;17(5):1703-1713. doi: 10.1109/TCBB.2019.2899574. Epub 2019 Feb 14.

本文引用的文献

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Tuning of a dead-time compensator focusing on industrial processes.死区时间补偿器的整定聚焦于工业过程。
ISA Trans. 2018 Dec;83:189-198. doi: 10.1016/j.isatra.2018.09.003. Epub 2018 Sep 15.
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Oscillatory Dynamics of P53 Network With Time Delays.具有时间延迟的P53网络的振荡动力学
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Intronic delay is essential for oscillatory expression in the segmentation clock.内含子延迟是节段时钟振荡表达所必需的。
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