School of Chemistry , Sambalpur University , Jyoti Vihar, Burla , Odisha 768 019 , India.
Division of Bioinformatics , Bose Institute , P-1/12 C.I.T. Scheme VII M , Kolkata 700054 , India.
J Phys Chem B. 2019 Aug 22;123(33):7113-7122. doi: 10.1021/acs.jpcb.9b04577. Epub 2019 Aug 8.
An envelope glycoprotein, gp41, is crucial for the entry of human immunodeficiency virus (HIV) into the host cell. The 20-23 N-terminal amino acid sequence of gp41 plays an important role in promoting fusion between viral and host cells. Interestingly, the structure and function of the fusion peptide are extremely sensitive to the characteristics of the lipid environment. In this present work, we have extensively utilized steady-state and time-resolved fluorescence spectroscopy in tandem with molecular dynamics simulation to elucidate peptide binding and peptide-induced perturbation to the membrane. We have used two depth-dependent fluorescence probes, 1,6-diphenyl-1,3,5-hexatriene (DPH) and its trimethylammonium derivative (TMA-DPH), to monitor the effect of peptide binding along the bilayer normal and have reconciled the experimental observation with the insights from the simulated molecular events. We have further monitored the effect of membrane cholesterol on peptide-induced membrane perturbation. The molecular dynamics simulation data show that the peptide alters the membrane properties in the vicinity of the peptide and it penetrates to a larger extent into the bilayer when the membrane contains cholesterol. Our results clearly elucidate that cholesterol alters the membrane physical properties in favor of membrane fusion and interaction pattern of the fusion peptide with the membrane in a concentration-dependent fashion. The role of cholesterol is specifically important as the host eukaryotic cells contain a decent amount of cholesterol that might be critical for the entry of HIV into the host cells.
包膜糖蛋白 gp41 对于人类免疫缺陷病毒 (HIV) 进入宿主细胞至关重要。gp41 的 20-23 个 N 端氨基酸序列在促进病毒和宿主细胞融合中发挥重要作用。有趣的是,融合肽的结构和功能对脂质环境的特性极其敏感。在本工作中,我们广泛利用稳态和时间分辨荧光光谱学与分子动力学模拟相结合,阐明肽结合和肽诱导的对膜的扰动。我们使用了两种深度依赖性荧光探针,1,6-二苯基-1,3,5-己三烯(DPH)及其三甲铵衍生物(TMA-DPH),以监测肽结合沿双层法线的影响,并将实验观察结果与模拟分子事件的见解进行了协调。我们进一步监测了膜胆固醇对肽诱导的膜扰动的影响。分子动力学模拟数据表明,肽改变了肽附近的膜性质,并且当膜含有胆固醇时,肽更深入地穿透到双层中。我们的结果清楚地阐明了胆固醇通过改变膜物理性质来促进膜融合,以及融合肽与膜的相互作用模式,这种相互作用模式呈浓度依赖性。胆固醇的作用特别重要,因为宿主真核细胞含有相当数量的胆固醇,这可能对 HIV 进入宿主细胞至关重要。