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新种,一株放线菌,分离自小麦根际土壤。

sp. nov., an actinobacterium isolated from the rhizosphere soil of wheat ( L.).

机构信息

Key Laboratory of Agricultural Microbiology of Heilongjiang Province, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin 150030, PR China.

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Oct;69(10):3268-3275. doi: 10.1099/ijsem.0.003621. Epub 2019 Jul 29.

Abstract

A Gram-stain-positive, aerobic, heterotrophic, non-spore-forming and rod-shaped strain, designated SJ-23, was isolated from rhizosphere soil of wheat ( L.) collected from Langfang, Hebei Province, central PR China and characterized using a polyphasic approach. Morphological and chemotaxonomic characteristics were consistent with those of members of the genus . The polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, glycolipid and three unidentified lipids. The predominant menaquinones detected were MK-12, MK-11 and MK-10. Major fatty acids were identified as anteiso-C, anteiso-C and iso-C. The 16S rRNA gene sequence analysis showed that strain SJ-23 belongs to the genus with high sequence similarities to DSM 43045 (99.2 %), subsp. DSM 8595 (98.8 %) and subsp. DSM 8596 (98.6 %). Results of phylogenetic analysis based on 16S rRNA gene sequences indicated that the strain formed a separate branch in the genus . Furthermore, the combination of DNA-DNA hybridization results and some phenotypic characteristics demonstrated that strain SJ-23 could be distinguished from its closest relatives. Therefore, it is proposed that strain SJ-23 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is SJ-23 (=CGMCC 4.7419=DSM 105049).

摘要

一株革兰氏阳性、需氧、异养、不产芽孢的杆状菌株 SJ-23 从中国河北省廊坊采集的小麦根际土壤中分离得到,采用多相分类法进行了表征。形态学和化学分类学特征与 属的成员一致。极性脂由二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油、糖脂和三种未鉴定的脂组成。检测到的主要类异戊二烯醌为 MK-12、MK-11 和 MK-10。主要脂肪酸为 anteiso-C、anteiso-C 和 iso-C。16S rRNA 基因序列分析表明,菌株 SJ-23 属于 属,与 DSM 43045(99.2%)、subsp. DSM 8595(98.8%)和 subsp. DSM 8596(98.6%)的相似度较高。基于 16S rRNA 基因序列的系统发育分析结果表明,该菌株在 属中形成了一个单独的分支。此外,DNA-DNA 杂交结果和一些表型特征的组合表明,菌株 SJ-23 可以与最接近的亲缘种区分开来。因此,建议将菌株 SJ-23 作为 属的一个新种,命名为 sp. nov.。其模式菌株为 SJ-23(=CGMCC 4.7419=DSM 105049)。

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