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本文引用的文献

1
The cryo-EM structure of a 12-subunit variant of RNA polymerase I reveals dissociation of the A49-A34.5 heterodimer and rearrangement of subunit A12.2.冷冻电镜结构显示,RNA 聚合酶 I 的 12 亚基变体发生解离,A49-A34.5 异二聚体发生解离,亚基 A12.2 发生重排。
Elife. 2019 Mar 26;8:e43204. doi: 10.7554/eLife.43204.
2
The chromatin landscape of the ribosomal RNA genes in mouse and human.小鼠和人类核糖体 RNA 基因的染色质景观。
Chromosome Res. 2019 Mar;27(1-2):31-40. doi: 10.1007/s10577-018-09603-9. Epub 2019 Jan 8.
3
Real-time assembly of ribonucleoprotein complexes on nascent RNA transcripts.在新生 RNA 转录本上实时组装核糖核蛋白复合物。
Nat Commun. 2018 Nov 30;9(1):5087. doi: 10.1038/s41467-018-07423-3.
4
NETSeq reveals heterogeneous nucleotide incorporation by RNA polymerase I.NETSeq 揭示 RNA 聚合酶 I 不均匀的核苷酸掺入。
Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):E11633-E11641. doi: 10.1073/pnas.1809421115. Epub 2018 Nov 27.
5
The A12.2 Subunit Is an Intrinsic Destabilizer of the RNA Polymerase I Elongation Complex.A12.2 亚基是 RNA 聚合酶 I 延伸复合物的内在稳定剂。
Biophys J. 2018 Jun 5;114(11):2507-2515. doi: 10.1016/j.bpj.2018.04.015.
6
A metastable rRNA junction essential for bacterial 30S biogenesis.一种对细菌 30S 生物发生至关重要的非稳定 rRNA 连接。
Nucleic Acids Res. 2018 Jun 1;46(10):5182-5194. doi: 10.1093/nar/gky120.
7
Small-Molecule Targeting of RNA Polymerase I Activates a Conserved Transcription Elongation Checkpoint.小分子靶向 RNA 聚合酶 I 激活保守的转录延伸检查点。
Cell Rep. 2018 Apr 10;23(2):404-414. doi: 10.1016/j.celrep.2018.03.066.
8
Molecular mechanisms driving transcriptional stress responses.驱动转录应激反应的分子机制。
Nat Rev Genet. 2018 Jun;19(6):385-397. doi: 10.1038/s41576-018-0001-6.
9
DNA replication stress restricts ribosomal DNA copy number.DNA复制应激限制核糖体DNA拷贝数。
PLoS Genet. 2017 Sep 15;13(9):e1007006. doi: 10.1371/journal.pgen.1007006. eCollection 2017 Sep.
10
Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes.核糖体复合物分级组装过程中蛋白质偶联RNA动力学的演变
Nat Commun. 2017 Sep 8;8(1):492. doi: 10.1038/s41467-017-00536-1.

RNA 聚合酶 I 对 rRNA 加工的协调控制。

Coordinated Control of rRNA Processing by RNA Polymerase I.

机构信息

Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

出版信息

Trends Genet. 2019 Oct;35(10):724-733. doi: 10.1016/j.tig.2019.07.002. Epub 2019 Jul 26.

DOI:10.1016/j.tig.2019.07.002
PMID:31358304
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6744312/
Abstract

Ribosomal RNA (rRNA) is co- and post-transcriptionally processed into active ribosomes. This process is dynamically regulated by direct covalent modifications of the polymerase that synthesizes the rRNA, RNA polymerase I (Pol I), and by interactions with cofactors that influence initiation, elongation, and termination activities of Pol I. The rate of transcription elongation by Pol I directly influences processing of nascent rRNA, and changes in Pol I transcription rate result in alternative rRNA processing events that lead to cellular signaling alterations and stress. It is clear that in divergent species, there exists robust organization of nascent rRNA processing events during transcription elongation. This review evaluates the current state of our understanding of the complex relationship between transcription elongation and rRNA processing.

摘要

核糖体 RNA(rRNA)通过转录和转录后过程被加工成有活性的核糖体。这一过程受到直接共价修饰 RNA 聚合酶 I(Pol I)的聚合酶以及与影响 Pol I 的起始、延伸和终止活性的辅助因子相互作用的动态调节。Pol I 的转录延伸速度直接影响新生 rRNA 的加工,Pol I 转录速率的变化导致 rRNA 加工事件的替代,从而导致细胞信号改变和应激。显然,在不同的物种中,在转录延伸过程中存在新生 rRNA 加工事件的稳健组织。本综述评价了我们目前对转录延伸和 rRNA 加工之间复杂关系的理解。