Gladstone Institutes, San Francisco, CA, USA.
Cardiovascular Research Institute, University of California, San Francisco, CA, USA.
Nat Ecol Evol. 2019 Aug;3(8):1241-1252. doi: 10.1038/s41559-019-0945-8. Epub 2019 Jul 29.
Monitor lizards are unique among ectothermic reptiles in that they have high aerobic capacity and distinctive cardiovascular physiology resembling that of endothermic mammals. Here, we sequence the genome of the Komodo dragon Varanus komodoensis, the largest extant monitor lizard, and generate a high-resolution de novo chromosome-assigned genome assembly for V. komodoensis using a hybrid approach of long-range sequencing and single-molecule optical mapping. Comparing the genome of V. komodoensis with those of related species, we find evidence of positive selection in pathways related to energy metabolism, cardiovascular homoeostasis, and haemostasis. We also show species-specific expansions of a chemoreceptor gene family related to pheromone and kairomone sensing in V. komodoensis and other lizard lineages. Together, these evolutionary signatures of adaptation reveal the genetic underpinnings of the unique Komodo dragon sensory and cardiovascular systems, and suggest that selective pressure altered haemostasis genes to help Komodo dragons evade the anticoagulant effects of their own saliva. The Komodo dragon genome is an important resource for understanding the biology of monitor lizards and reptiles worldwide.
巨蜥是变温爬行动物中独一无二的,它们具有很高的需氧能力和独特的心血管生理学特性,类似于恒温哺乳动物。在这里,我们对科莫多巨蜥(Varanus komodoensis)进行了基因组测序,科莫多巨蜥是现存最大的巨蜥,我们使用长距离测序和单分子光学图谱的混合方法,为 V. komodoensis 生成了高分辨率的从头染色体分配基因组组装。将 V. komodoensis 的基因组与相关物种的基因组进行比较,我们发现了与能量代谢、心血管稳态和止血相关途径的正选择证据。我们还在 V. komodoensis 和其他蜥蜴谱系中展示了与信息素和引诱剂感应相关的化学感受器基因家族的物种特异性扩张。这些适应的进化特征共同揭示了科莫多龙独特的感觉和心血管系统的遗传基础,并表明选择性压力改变了止血基因,以帮助科莫多龙逃避其自身唾液的抗凝作用。科莫多龙基因组是了解全球巨蜥和爬行动物生物学的重要资源。