• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

焦磷酸测序与甲基化特异性 PCR 检测胶质母细胞瘤患者肿瘤及血标本 MGMT 甲基化状态的比较

Pyrosequencing versus methylation-specific PCR for assessment of MGMT methylation in tumor and blood samples of glioblastoma patients.

机构信息

Medical Oncology Service, Catalan Institute of Oncology Badalona, Hospital Germans Trias i Pujol, Applied Research Group in Oncology (B-ARGO Group), Badalona, Spain.

Pathology Service, University Hospital Germans Trias i Pujol, Badalona, Spain.

出版信息

Sci Rep. 2019 Jul 31;9(1):11125. doi: 10.1038/s41598-019-47642-2.

DOI:10.1038/s41598-019-47642-2
PMID:31366977
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6668570/
Abstract

Circulating biomarkers in blood may provide an interesting alternative to risky tissue biopsies in the diagnosis and follow-up of glioblastoma patients. We have assessed MGMT methylation status in blood and tissue samples from unresected glioblastoma patients who had been included in the randomized GENOM-009 trial. Paired blood and tissue samples were assessed by methylation-specific PCR (MSP) and pyrosequencing (PYR). After establishing the minimum PYR cut-off that could yield a significant difference in overall survival, we assessed the sensitivity, specificity, positive predictive value and negative predictive value (NPV) of the analyses. Methylation could be detected in cfDNA by both MSP and PYR but with low concordance with results in tissue. Sensitivity was low for both methods (31% and 38%, respectively), while specificity was higher for MSP in blood than for PYR in plasma (96% vs 76%) and NPV was similar (56 vs 57%). Concordance of results in tissue by MSP and PYR was 84.3% (P < 0.001) and correlated with outcome. We conclude that detection of cfDNA in the blood of glioblastoma patients can be an alternative when tumor tissue is not available but methods for the detection of cfDNA in blood must improve before it can replace analysis in tumor tissue.

摘要

血液中的循环生物标志物可能为胶质母细胞瘤患者的诊断和随访提供一种有吸引力的风险组织活检替代方法。我们评估了未切除的胶质母细胞瘤患者的血液和组织样本中的 MGMT 甲基化状态,这些患者曾参与随机 GENOM-009 试验。通过甲基化特异性 PCR(MSP)和焦磷酸测序(PYR)评估配对的血液和组织样本。在确定可在总生存期方面产生显著差异的最小 PYR 截止值后,我们评估了分析的敏感性、特异性、阳性预测值和阴性预测值(NPV)。MSP 和 PYR 均可检测到 cfDNA 中的甲基化,但与组织结果的一致性较低。两种方法的敏感性均较低(分别为 31%和 38%),而 MSP 在血液中的特异性高于 PYR 在血浆中的特异性(96%对 76%),NPV 相似(56%对 57%)。MSP 和 PYR 在组织中的结果一致性为 84.3%(P < 0.001),与结局相关。我们得出结论,当肿瘤组织不可用时,胶质母细胞瘤患者血液中的 cfDNA 检测可以作为替代方法,但在 cfDNA 在血液中的检测方法得到改进之前,它不能替代肿瘤组织中的分析。

相似文献

1
Pyrosequencing versus methylation-specific PCR for assessment of MGMT methylation in tumor and blood samples of glioblastoma patients.焦磷酸测序与甲基化特异性 PCR 检测胶质母细胞瘤患者肿瘤及血标本 MGMT 甲基化状态的比较
Sci Rep. 2019 Jul 31;9(1):11125. doi: 10.1038/s41598-019-47642-2.
2
Tumour and serum MGMT promoter methylation and protein expression in glioblastoma patients.胶质母细胞瘤患者的肿瘤和血清 MGMT 启动子甲基化和蛋白表达。
Clin Transl Oncol. 2011 Sep;13(9):677-85. doi: 10.1007/s12094-011-0714-x.
3
Digital PCR quantification of MGMT methylation refines prediction of clinical benefit from alkylating agents in glioblastoma and metastatic colorectal cancer.数字 PCR 定量检测 MGMT 甲基化可改善胶质母细胞瘤和转移性结直肠癌患者对烷化剂治疗的临床获益预测。
Ann Oncol. 2015 Sep;26(9):1994-1999. doi: 10.1093/annonc/mdv272. Epub 2015 Jun 25.
4
Prognosis of glioblastoma with faint MGMT methylation-specific PCR product.具有微弱O-6-甲基鸟嘌呤-DNA甲基转移酶(MGMT)甲基化特异性PCR产物的胶质母细胞瘤的预后
J Neurooncol. 2015 Mar;122(1):179-88. doi: 10.1007/s11060-014-1701-1. Epub 2015 Jan 10.
5
Comparative assessment of three methods to analyze MGMT methylation status in a series of 350 gliomas and gangliogliomas.对350例胶质瘤和神经节胶质瘤系列中三种分析MGMT甲基化状态方法的比较评估。
Pathol Res Pract. 2017 Dec;213(12):1489-1493. doi: 10.1016/j.prp.2017.10.007. Epub 2017 Oct 10.
6
MGMT promoter methylation determined by HRM in comparison to MSP and pyrosequencing for predicting high-grade glioma response.通过高分辨率熔解曲线分析(HRM)测定的O6-甲基鸟嘌呤-DNA甲基转移酶(MGMT)启动子甲基化与甲基化特异性PCR(MSP)和焦磷酸测序相比,用于预测高级别胶质瘤的反应。
Clin Epigenetics. 2016 May 5;8:49. doi: 10.1186/s13148-016-0204-7. eCollection 2016.
7
A simple quantitative diagnostic alternative for MGMT DNA-methylation testing on RCL2 fixed paraffin embedded tumors using restriction coupled qPCR.一种使用限制性酶切偶联定量聚合酶链反应在RCL2固定石蜡包埋肿瘤上进行MGMT DNA甲基化检测的简单定量诊断替代方法。
Clin Neuropathol. 2014 Jan-Feb;33(1):50-60. doi: 10.5414/NP300633.
8
Exclusion of histiocytes/endothelial cells and using endothelial cells as internal reference are crucial for interpretation of MGMT immunohistochemistry in glioblastoma.排除组织细胞/内皮细胞并用内皮细胞作为内参对于胶质母细胞瘤中 MGMT 免疫组化的解读至关重要。
Am J Surg Pathol. 2013 Feb;37(2):264-71. doi: 10.1097/PAS.0b013e318267b061.
9
The correlation and prognostic significance of MGMT promoter methylation and MGMT protein in glioblastomas.胶质母细胞瘤中MGMT启动子甲基化与MGMT蛋白的相关性及预后意义
Neurosurgery. 2009 Nov;65(5):866-75; discussion 875. doi: 10.1227/01.NEU.0000357325.90347.A1.
10
Gene Promoter Methylation Status - Assessment of Two Pyrosequencing Kits and Three Methylation-specific PCR Methods for their Predictive Capacity in Glioblastomas.基因启动子甲基化状态——两种焦磷酸测序试剂盒和三种甲基化特异性PCR方法在胶质母细胞瘤预测能力方面的评估
Cancer Genomics Proteomics. 2018 Nov-Dec;15(6):437-446. doi: 10.21873/cgp.20102.

引用本文的文献

1
DNA methylation in breast cancer: early detection and biomarker discovery through current and emerging approaches.乳腺癌中的DNA甲基化:通过现有及新兴方法进行早期检测和生物标志物发现
J Transl Med. 2025 Apr 23;23(1):465. doi: 10.1186/s12967-025-06495-2.
2
MGMT epimutations and risk of incident cancer of the colon, glioblastoma multiforme, and diffuse large B cell lymphomas.O6-甲基鸟嘌呤-DNA甲基转移酶表观突变与结肠癌、多形性胶质母细胞瘤和弥漫性大B细胞淋巴瘤的发病风险
Clin Epigenetics. 2025 Feb 20;17(1):28. doi: 10.1186/s13148-025-01835-x.
3
Modulating cell-free DNA biology as the next frontier in liquid biopsies.

本文引用的文献

1
Promoter Methylation Cutoff with Safety Margin for Selecting Glioblastoma Patients into Trials Omitting Temozolomide: A Pooled Analysis of Four Clinical Trials.有安全边际的启动子甲基化临界值选择胶质母细胞瘤患者入组避免替莫唑胺治疗的临床试验:四项临床试验的汇总分析。
Clin Cancer Res. 2019 Mar 15;25(6):1809-1816. doi: 10.1158/1078-0432.CCR-18-3181. Epub 2018 Dec 4.
2
CBTRUS Statistical Report: Primary Brain and Other Central Nervous System Tumors Diagnosed in the United States in 2011-2015.CBTRUS统计报告:2011 - 2015年美国原发性脑肿瘤及其他中枢神经系统肿瘤诊断情况
Neuro Oncol. 2018 Oct 1;20(suppl_4):iv1-iv86. doi: 10.1093/neuonc/noy131.
3
调控游离DNA生物学作为液体活检的下一个前沿领域。
Trends Cell Biol. 2025 Jun;35(6):459-469. doi: 10.1016/j.tcb.2024.11.007. Epub 2024 Dec 26.
4
Application of Circulating Tumor DNA in the Auxiliary Diagnosis and Prognosis Prediction of Glioma.循环肿瘤DNA在胶质瘤辅助诊断及预后预测中的应用
Cell Mol Neurobiol. 2024 Dec 18;45(1):6. doi: 10.1007/s10571-024-01515-z.
5
Identification of 7-HOCA as a Potential Biomarker in Glioblastoma: Evidence from Genome-Wide Association Study and Clinical Validation.7-羟基肉桂酸作为胶质母细胞瘤潜在生物标志物的鉴定:来自全基因组关联研究和临床验证的证据
Int J Gen Med. 2024 Dec 13;17:6185-6197. doi: 10.2147/IJGM.S493488. eCollection 2024.
6
Evaluation of the clinical use of MGMT methylation in extracellular vesicle-based liquid biopsy as a tool for glioblastoma patient management.基于细胞外囊泡的液体活检中 MGMT 甲基化的临床应用评价作为胶质母细胞瘤患者管理的工具。
Sci Rep. 2024 May 18;14(1):11398. doi: 10.1038/s41598-024-62061-8.
7
Liquid Biopsy for Glioma Using Cell-Free DNA in Cerebrospinal Fluid.利用脑脊液中的游离DNA对胶质瘤进行液体活检
Cancers (Basel). 2024 Feb 29;16(5):1009. doi: 10.3390/cancers16051009.
8
The C250T Mutation of Might Grant a Better Prognosis to Glioblastoma by Exerting Less Biological Effect on Telomeres and Chromosomes Than the C228T Mutation.与C228T突变相比,C250T突变对端粒和染色体产生的生物学效应较小,可能会使胶质母细胞瘤的预后更好。
Cancers (Basel). 2024 Feb 9;16(4):735. doi: 10.3390/cancers16040735.
9
Variant allelic frequencies of driver mutations can identify gliomas with potentially false-negative MGMT promoter methylation results.驱动基因突变的变异等位基因频率可以识别可能存在 MGMT 启动子甲基化结果假阴性的胶质瘤。
Acta Neuropathol Commun. 2023 Nov 2;11(1):175. doi: 10.1186/s40478-023-01680-0.
10
Molecular Biomarkers and Recent Liquid Biopsy Testing Progress: A Review of the Application of Biosensors for the Diagnosis of Gliomas.分子生物标志物与近期液体活检检测进展:生物传感器在脑胶质瘤诊断中应用的综述
Molecules. 2023 Jul 26;28(15):5660. doi: 10.3390/molecules28155660.
Detection of cell-free DNA fragmentation and copy number alterations in cerebrospinal fluid from glioma patients.
检测胶质瘤患者脑脊液中的游离 DNA 片段化和拷贝数改变。
EMBO Mol Med. 2018 Dec;10(12). doi: 10.15252/emmm.201809323.
4
Gene Promoter Methylation Status - Assessment of Two Pyrosequencing Kits and Three Methylation-specific PCR Methods for their Predictive Capacity in Glioblastomas.基因启动子甲基化状态——两种焦磷酸测序试剂盒和三种甲基化特异性PCR方法在胶质母细胞瘤预测能力方面的评估
Cancer Genomics Proteomics. 2018 Nov-Dec;15(6):437-446. doi: 10.21873/cgp.20102.
5
A novel analytical model of MGMT methylation pyrosequencing offers improved predictive performance in patients with gliomas.一种新型的 MGMT 甲基化焦磷酸测序分析模型可提高脑胶质瘤患者的预测性能。
Mod Pathol. 2019 Jan;32(1):4-15. doi: 10.1038/s41379-018-0143-2. Epub 2018 Oct 5.
6
cIMPACT-NOW update 3: recommended diagnostic criteria for "Diffuse astrocytic glioma, IDH-wildtype, with molecular features of glioblastoma, WHO grade IV".cIMPACT-NOW更新3:“弥漫性星形细胞胶质瘤,IDH野生型,具有胶质母细胞瘤分子特征,WHO四级”的推荐诊断标准。
Acta Neuropathol. 2018 Nov;136(5):805-810. doi: 10.1007/s00401-018-1913-0. Epub 2018 Sep 26.
7
MGMT promoter methylation status testing to guide therapy for glioblastoma: refining the approach based on emerging evidence and current challenges.MGMT 启动子甲基化状态检测指导胶质母细胞瘤的治疗:基于新出现的证据和当前的挑战来改进方法。
Neuro Oncol. 2019 Feb 14;21(2):167-178. doi: 10.1093/neuonc/noy132.
8
Blood-based biomarkers for the diagnosis and monitoring of gliomas.用于诊断和监测脑胶质瘤的基于血液的生物标志物。
Neuro Oncol. 2018 Aug 2;20(9):1155-1161. doi: 10.1093/neuonc/noy074.
9
Molecular Diagnosis of Diffuse Gliomas through Sequencing of Cell-Free Circulating Tumor DNA from Cerebrospinal Fluid.通过对脑脊液中游离循环肿瘤 DNA 进行测序对弥漫性神经胶质瘤进行分子诊断。
Clin Cancer Res. 2018 Jun 15;24(12):2812-2819. doi: 10.1158/1078-0432.CCR-17-3800. Epub 2018 Apr 3.
10
Liquid Biopsy in Primary Brain Tumors: Looking for Stardust!原发性脑肿瘤的液体活检:寻找星尘!
Curr Neurol Neurosci Rep. 2018 Mar 9;18(3):13. doi: 10.1007/s11910-018-0820-z.