Nadendla Karthik, Sarode Bhagyesh, Friedman Simon H
Division of Pharmaceutical Sciences, University of Missouri-Kansas City, School of Pharmacy, Kansas City, MO, United States.
Division of Pharmaceutical Sciences, University of Missouri-Kansas City, School of Pharmacy, Kansas City, MO, United States.
Methods Enzymol. 2019;624:113-128. doi: 10.1016/bs.mie.2019.04.008. Epub 2019 Apr 25.
In this work, we describe methods for synthesizing and incorporating a wide range of photocleavable groups into proteins. These are based on the di-methoxyl nitro phenyl ethyl (DMNPE) group. Using a common ketone starting material, we have modified the DMNPE core with different peptides and small molecules. We describe how these can be incorporated into DMNPE either by solution or solid phase methods. In addition, we show how the ketone group can be effectively converted into a hydrazone group and ultimately into a diazo. The potential pitfall of azine formation is also delineated, as are the strategies for avoiding this side product. We then show how these modified diazo groups can then be reacted with the carboxyl groups of the protein to make the final ester product. Finally, we show how the ultimate product can be purified, and the products identified using 280 and 345nm ratios, as well as ESI-MS characterization. The combined methods should allow the incorporation of many possible photocleavable groups into a range of proteins, and allow the ultimate properties of the modified protein to be subsequently toggled with light.
在这项工作中,我们描述了将多种可光裂解基团合成并引入蛋白质的方法。这些方法基于二甲基氧基硝基苯乙基(DMNPE)基团。使用常见的酮类起始原料,我们用不同的肽和小分子对DMNPE核心进行了修饰。我们描述了如何通过溶液法或固相法将它们引入DMNPE中。此外,我们展示了酮基如何有效地转化为重氮基团,最终转化为重氮化合物。还阐述了形成嗪的潜在陷阱以及避免这种副产物的策略。然后,我们展示了这些修饰的重氮基团如何与蛋白质的羧基反应以制成最终的酯产物。最后,我们展示了最终产物如何进行纯化,以及如何使用280和345nm的吸光度比值以及电喷雾电离质谱(ESI-MS)表征来鉴定产物。这些组合方法应能将许多可能的可光裂解基团引入一系列蛋白质中,并使随后能够用光来切换修饰后蛋白质的最终性质。