• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

优化的 CRISPR/Cas9 介导的体内基因组工程适用于监测小鼠神经组织中内源性蛋白质的动态变化。

Optimized CRISPR/Cas9-mediated in vivo genome engineering applicable to monitoring dynamics of endogenous proteins in the mouse neural tissues.

机构信息

Laboratory of Cell and Molecular Biology, Graduate School of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigori-Cho, Ako-Gun, Hyogo, 678-1297, Japan.

Institute for Integrated Cell-Material Sciences (iCeMS), Kyoto University, Yoshida-Honmachi, Sakyo-Ku, Kyoto, 606-8501, Japan.

出版信息

Sci Rep. 2019 Aug 5;9(1):11309. doi: 10.1038/s41598-019-47721-4.

DOI:10.1038/s41598-019-47721-4
PMID:31383899
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6683140/
Abstract

To analyze the expression, localization, and functional dynamics of target proteins in situ, especially in living cells, it is important to develop a convenient, versatile, and efficient method to precisely introduce exogenous genes into the genome, which is applicable for labeling and engineering of the endogenous proteins of interest. By combining the CRISPR/Cas9 genome editing technology with an electroporation technique, we succeeded in creating knock-in alleles, from which GFP (RFP)-tagged endogenous proteins are produced, in neurons and glial cells in vivo in the developing mouse retina and brain. Correct gene targeting was confirmed by single-cell genotyping and Western blot analysis. Several gene loci were successfully targeted with high efficiency. Moreover, we succeeded in engineering the mouse genome to express foreign genes from the endogenous gene loci using a self-cleaving 2A peptide. Our method could be used to monitor the physiological changes in localization of endogenous proteins and expression levels of both mRNA and protein at a single cell resolution. This work discloses a powerful and widely applicable approach for visualization and manipulation of endogenous proteins in neural tissues.

摘要

为了分析目标蛋白质在原位(尤其是在活细胞中)的表达、定位和功能动态,开发一种方便、通用和高效的方法将外源性基因精确引入基因组中非常重要,这对于标记和工程感兴趣的内源性蛋白质很有用。通过将 CRISPR/Cas9 基因组编辑技术与电穿孔技术相结合,我们成功地在发育中的小鼠视网膜和大脑的神经元和神经胶质细胞中创建了 knock-in 等位基因,从这些等位基因中产生 GFP(RFP)标记的内源性蛋白质。通过单细胞基因分型和 Western blot 分析证实了正确的基因靶向。我们以高效率成功靶向了多个基因座。此外,我们还成功地利用自切割 2A 肽将小鼠基因组工程化以从内源性基因座表达外源基因。我们的方法可用于监测内源性蛋白质定位和 mRNA 及蛋白质表达水平的单细胞分辨率的生理变化。这项工作揭示了一种强大且广泛适用于神经组织中内源性蛋白质可视化和操作的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/f68c5178bcbc/41598_2019_47721_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/7f841ab3e423/41598_2019_47721_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/c04fa4f607d3/41598_2019_47721_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/a3c243cbeee4/41598_2019_47721_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/365095a6da96/41598_2019_47721_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/959522acc321/41598_2019_47721_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/f68c5178bcbc/41598_2019_47721_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/7f841ab3e423/41598_2019_47721_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/c04fa4f607d3/41598_2019_47721_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/a3c243cbeee4/41598_2019_47721_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/365095a6da96/41598_2019_47721_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/959522acc321/41598_2019_47721_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bf7/6683140/f68c5178bcbc/41598_2019_47721_Fig6_HTML.jpg

相似文献

1
Optimized CRISPR/Cas9-mediated in vivo genome engineering applicable to monitoring dynamics of endogenous proteins in the mouse neural tissues.优化的 CRISPR/Cas9 介导的体内基因组工程适用于监测小鼠神经组织中内源性蛋白质的动态变化。
Sci Rep. 2019 Aug 5;9(1):11309. doi: 10.1038/s41598-019-47721-4.
2
Use of CRISPR/Cas9 for the Modification of the Mouse Genome.使用CRISPR/Cas9对小鼠基因组进行修饰。
Methods Mol Biol. 2019;1953:213-230. doi: 10.1007/978-1-4939-9145-7_13.
3
CRISPR-Cas9 system: A new-fangled dawn in gene editing.CRISPR-Cas9 系统:基因编辑的崭新时代。
Life Sci. 2019 Sep 1;232:116636. doi: 10.1016/j.lfs.2019.116636. Epub 2019 Jul 8.
4
Imaging endogenous synaptic proteins in primary neurons at single-cell resolution using CRISPR/Cas9.使用 CRISPR/Cas9 技术在原代神经元中以单细胞分辨率成像内源性突触蛋白。
Mol Biol Cell. 2019 Oct 15;30(22):2838-2855. doi: 10.1091/mbc.E19-04-0223. Epub 2019 Sep 11.
5
CRISPR/Cas9-based genome engineering of zebrafish using a seamless integration strategy.利用无缝整合策略的基于 CRISPR/Cas9 的斑马鱼基因组工程。
FASEB J. 2018 Sep;32(9):5132-5142. doi: 10.1096/fj.201800077RR. Epub 2018 May 29.
6
Breasi-CRISPR: an efficient genome-editing method to interrogate protein localization and protein-protein interactions in the embryonic mouse cortex.Breasi-CRISPR:一种高效的基因组编辑方法,用于研究胚胎期小鼠皮层中蛋白质定位和蛋白质-蛋白质相互作用。
Development. 2022 Sep 15;149(18). doi: 10.1242/dev.200616. Epub 2022 Sep 26.
7
Site-Specific Integration of Exogenous Genes Using Genome Editing Technologies in Zebrafish.利用基因组编辑技术在斑马鱼中实现外源基因的位点特异性整合
Int J Mol Sci. 2016 May 13;17(5):727. doi: 10.3390/ijms17050727.
8
Recent advances in CRISPR/Cas9 mediated genome editing in Bacillus subtilis.枯草芽孢杆菌中 CRISPR/Cas9 介导的基因组编辑技术的最新进展。
World J Microbiol Biotechnol. 2018 Sep 29;34(10):153. doi: 10.1007/s11274-018-2537-1.
9
Genome editing in the mammalian brain using the CRISPR-Cas system.利用CRISPR-Cas系统在哺乳动物大脑中进行基因组编辑。
Neurosci Res. 2019 Apr;141:4-12. doi: 10.1016/j.neures.2018.07.003. Epub 2018 Aug 1.
10
Gene Therapy with CRISPR/Cas9 Coming to Age for HIV Cure.基因治疗与 CRISPR/Cas9 渐趋成熟,有望攻克 HIV。
AIDS Rev. 2017 Oct-Dec;19(3):167-172.

引用本文的文献

1
Optimization of HITI-Mediated Gene Insertion for Rhodopsin and Peripherin-2 in Mouse Rod Photoreceptors: Targeting Dominant Retinitis Pigmentosa.优化 HITI 介导的视紫红质和周边蛋白-2 基因插入在小鼠光感受器中的效率:针对显性视网膜色素变性。
Invest Ophthalmol Vis Sci. 2024 Nov 4;65(13):38. doi: 10.1167/iovs.65.13.38.
2
RNA-based cooperative protein labeling that permits direct monitoring of the intracellular concentration change of an endogenous protein.基于 RNA 的合作蛋白标记,可直接监测内源性蛋白质的细胞内浓度变化。
Nucleic Acids Res. 2021 Dec 16;49(22):e132. doi: 10.1093/nar/gkab839.
3
CRISPR-mediated Labeling of Cells in Chick Embryos Based on Selectively Expressed Genes.

本文引用的文献

1
Use of two gRNAs for CRISPR/Cas9 improves bi-allelic homologous recombination efficiency in mouse embryonic stem cells.在小鼠胚胎干细胞中使用两个gRNA进行CRISPR/Cas9可提高双等位基因同源重组效率。
Genesis. 2018 May;56(5):e23212. doi: 10.1002/dvg.23212. Epub 2018 May 11.
2
Multiple sgRNAs with overlapping sequences enhance CRISPR/Cas9-mediated knock-in efficiency.多个具有重叠序列的 sgRNA 可提高 CRISPR/Cas9 介导的基因敲入效率。
Exp Mol Med. 2018 Apr 6;50(4):1-9. doi: 10.1038/s12276-018-0037-x.
3
Enhanced proofreading governs CRISPR-Cas9 targeting accuracy.
基于选择性表达基因的CRISPR介导的鸡胚细胞标记
Bio Protoc. 2021 Aug 5;11(15):e4105. doi: 10.21769/BioProtoc.4105.
4
A cell atlas of the chick retina based on single-cell transcriptomics.基于单细胞转录组学的鸡视网膜细胞图谱
Elife. 2021 Jan 4;10:e63907. doi: 10.7554/eLife.63907.
5
Targeted Knockout of the Vegfa Gene in the Retina by Subretinal Injection of RNP Complexes Containing Cas9 Protein and Modified sgRNAs.通过含有 Cas9 蛋白和修饰 sgRNA 的 RNP 复合物的视网膜下注射靶向敲除视网膜中的 Vegfa 基因。
Mol Ther. 2021 Jan 6;29(1):191-207. doi: 10.1016/j.ymthe.2020.09.032. Epub 2020 Sep 23.
6
Development of an experimental method of systematically estimating protein expression limits in HEK293 cells.开发一种系统估计 HEK293 细胞中蛋白质表达极限的实验方法。
Sci Rep. 2020 Mar 16;10(1):4798. doi: 10.1038/s41598-020-61646-3.
增强型校对控制CRISPR-Cas9靶向准确性。
Nature. 2017 Oct 19;550(7676):407-410. doi: 10.1038/nature24268. Epub 2017 Sep 20.
4
Homology-mediated end joining-based targeted integration using CRISPR/Cas9.使用CRISPR/Cas9基于同源介导的末端连接的靶向整合。
Cell Res. 2017 Jun;27(6):801-814. doi: 10.1038/cr.2017.76. Epub 2017 May 19.
5
Fluorescent protein tagging of endogenous protein in brain neurons using CRISPR/Cas9-mediated knock-in and in utero electroporation techniques.利用CRISPR/Cas9介导的敲入和子宫内电穿孔技术对脑神经元中的内源性蛋白质进行荧光蛋白标记。
Sci Rep. 2016 Oct 26;6:35861. doi: 10.1038/srep35861.
6
Developing a de novo targeted knock-in method based on in utero electroporation into the mammalian brain.基于子宫内电穿孔技术开发一种用于哺乳动物大脑的全新靶向基因敲入方法。
Development. 2016 Sep 1;143(17):3216-22. doi: 10.1242/dev.136325.
7
High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing.通过体内基因组编辑对哺乳动物大脑中的蛋白质定位进行高通量、高分辨率映射
Cell. 2016 Jun 16;165(7):1803-1817. doi: 10.1016/j.cell.2016.04.044. Epub 2016 May 12.
8
CRISPR/Cas9-mediated gene knockout in the mouse brain using in utero electroporation.利用子宫内电穿孔技术在小鼠大脑中进行CRISPR/Cas9介导的基因敲除。
Sci Rep. 2016 Feb 9;6:20611. doi: 10.1038/srep20611.
9
High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects.具有不可检测的全基因组脱靶效应的高保真CRISPR-Cas9核酸酶。
Nature. 2016 Jan 28;529(7587):490-5. doi: 10.1038/nature16526. Epub 2016 Jan 6.
10
Rationally engineered Cas9 nucleases with improved specificity.具有更高特异性的理性设计的Cas9核酸酶。
Science. 2016 Jan 1;351(6268):84-8. doi: 10.1126/science.aad5227. Epub 2015 Dec 1.