Department of Medical Biochemistry and Biophysics, Division of Molecular Metabolism, Karolinska Institutet, Solnavägen 9, 171 77 Stockholm, Sweden.
Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, 171 77 Stockholm, Sweden.
Nucleic Acids Res. 2019 Sep 26;47(17):9386-9399. doi: 10.1093/nar/gkz684.
In all biological systems, RNAs are associated with RNA-binding proteins (RBPs), forming complexes that control gene regulatory mechanisms, from RNA synthesis to decay. In mammalian mitochondria, post-transcriptional regulation of gene expression is conducted by mitochondrial RBPs (mt-RBPs) at various stages of mt-RNA metabolism, including polycistronic transcript production, its processing into individual transcripts, mt-RNA modifications, stability, translation and degradation. To date, only a handful of mt-RBPs have been characterized. Here, we describe a putative human mitochondrial protein, C6orf203, that contains an S4-like domain-an evolutionarily conserved RNA-binding domain previously identified in proteins involved in translation. Our data show C6orf203 to bind highly structured RNA in vitro and associate with the mitoribosomal large subunit in HEK293T cells. Knockout of C6orf203 leads to a decrease in mitochondrial translation and consequent OXPHOS deficiency, without affecting mitochondrial RNA levels. Although mitoribosome stability is not affected in C6orf203-depleted cells, mitoribosome profiling analysis revealed a global disruption of the association of mt-mRNAs with the mitoribosome, suggesting that C6orf203 may be required for the proper maturation and functioning of the mitoribosome. We therefore propose C6orf203 to be a novel RNA-binding protein involved in mitochondrial translation, expanding the repertoire of factors engaged in this process.
在所有生物系统中,RNA 都与 RNA 结合蛋白 (RBP) 相关联,形成控制基因调控机制的复合物,从 RNA 合成到降解。在哺乳动物线粒体中,转录后基因表达的调控是由线粒体 RBP(mt-RBP)在 mt-RNA 代谢的各个阶段进行的,包括多顺反子转录物的产生、其加工成单个转录物、mt-RNA 修饰、稳定性、翻译和降解。迄今为止,只有少数 mt-RBPs 被表征。在这里,我们描述了一种假定的人类线粒体蛋白 C6orf203,它含有一个 S4 样结构域——一种在参与翻译的蛋白质中发现的进化保守的 RNA 结合结构域。我们的数据表明 C6orf203 在体外结合高度结构化的 RNA,并在 HEK293T 细胞中与线粒体核糖体大亚基结合。C6orf203 的敲除导致线粒体翻译减少和随后的 OXPHOS 缺陷,而不影响线粒体 RNA 水平。尽管 C6orf203 耗尽的细胞中线粒体核糖体的稳定性不受影响,但线粒体核糖体分析显示 mt-mRNAs 与线粒体核糖体的结合受到全面破坏,表明 C6orf203 可能是线粒体核糖体正确成熟和功能所必需的。因此,我们提出 C6orf203 是一种参与线粒体翻译的新型 RNA 结合蛋白,扩展了参与该过程的因子的范围。