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[延伸因子P:功能的新机制与翻译调控的进化多样性]

[Elongation Factor P: New Mechanisms of Function and an Evolutionary Diversity of Translation Regulation].

作者信息

Golubev A A, Validov Sh Z, Usachev K S, Yusupov M M

机构信息

Institute of Fundamental Medicine and Biology, Kazan (Volga) Federal University, Kazan, 420008 Russia.

Institut de Génétique et de Biologie Moléculaire et Cellulaire, Strasbourg, 67404 France.

出版信息

Mol Biol (Mosk). 2019 Jul-Aug;53(4):561-573. doi: 10.1134/S0026898419040037.

Abstract

The protein synthesis in cells occurs in ribosomes, with the involvement of protein translational factors. One of these translational factors is the elongation factor P (EF-P). EF-P is a three-domain protein that binds between the P and E sites of the ribosome, near the P-tRNA, the peptidyl transferase center, and E-site codon of the mRNA. The majority of studies showed that the EF-P helps the ribosome to synthesize stalling amino acid motifs, such as polyprolines. In the first part of this review, we inspect the general evolutionary variety of the EF-P in different organisms, the problems of the regulation provided by the EF-P, and its role in the sustainability of the protein balance in the cell in different physiological states. Although the functions of the EF-P have been well studied, there are still some problems that remain to be solved. The data from recent studies contradict the previous theories. Consequently, in the second part, we discuss the recent data that suggest the involvement of the EF-P in each translocation event, not only in those related to poly-proline synthesis. This activity contradicts some aspects of the known pathway of the removal of the E-tRNA during the translocation event. In addition, in the third part of this review, we tried to partly shift the interest from the antistalling activity of domain I of the EF-P to the action of domain III, the functions of which has not been closely studied. We expand on the idea about the involvement of domain III of the EF-P in preventing the frameshift and debate the EF-P's evolutionary history.

摘要

细胞中的蛋白质合成发生在核糖体中,涉及蛋白质翻译因子。这些翻译因子之一是延伸因子P(EF-P)。EF-P是一种三结构域蛋白,它结合在核糖体的P位和E位之间,靠近P位tRNA、肽基转移酶中心以及mRNA的E位密码子。大多数研究表明,EF-P有助于核糖体合成易停顿的氨基酸基序,如多聚脯氨酸。在本综述的第一部分,我们考察了不同生物体中EF-P的一般进化多样性、EF-P提供的调控问题及其在不同生理状态下细胞蛋白质平衡维持中的作用。尽管EF-P的功能已得到充分研究,但仍有一些问题有待解决。最近的研究数据与先前的理论相矛盾。因此,在第二部分,我们讨论了最近的数据,这些数据表明EF-P参与了每一次转位事件,而不仅仅是与多聚脯氨酸合成相关的事件。这种活性与转位事件中已知的E位tRNA去除途径的某些方面相矛盾。此外,在本综述的第三部分,我们试图部分地将研究兴趣从EF-P结构域I的抗停顿活性转移到结构域III的作用上,其功能尚未得到深入研究。我们进一步阐述了EF-P结构域III参与防止移码的观点,并讨论了EF-P的进化历史。

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