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荧光融合蛋白支持病毒小终止酶亚基(TerS)双环 pac 连接处 DNA 包装模型。

A viral small terminase subunit (TerS) twin ring pac synapsis DNA packaging model is supported by fluorescent fusion proteins.

机构信息

Department of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.

Department of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA; Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.

出版信息

Virology. 2019 Oct;536:39-48. doi: 10.1016/j.virol.2019.07.021. Epub 2019 Jul 25.

Abstract

A bacteriophage T4 DNA "synapsis model" proposes that the bacteriophage T4 terminase small subunit (TerS) apposes two pac site containing dsDNA homologs to gauge concatemer maturation adequate for packaging initiation. N-terminus, C-terminus, or both ends modified fusion Ter S proteins retain function. Replacements of the TerS gene in the T4 genome with fusion genes encoding larger (18-45 kDa) TerS-eGFP and TerS-mCherry fluorescent fusion proteins function without significant change in phenotype. Co-infection and co-expression by T4 phages encoding TerS-eGFP and TerS-mCherry shows in vivo FRET in infected bacteria comparable to that of the purified, denatured and then renatured, mixed fusion proteins in vitro. FRET of purified, denatured-renatured, mixed temperature sensitive and native TerS fusion proteins at low and high temperature in vitro shows that TerS ring-like oligomer formation is essential for function in vivo. Super-resolution STORM and PALM microscopy of intercalating dye YOYO-1 DNA and photoactivatable TerS-PAmCherry-C1 fusions support accumulation of TerS dimeric or multiple ring-like oligomer structures containing DNA and gp16-mCherry in vivo as well as in vitro to regulate pac site cutting.

摘要

噬菌体 T4 DNA“联会模型”提出,噬菌体 T4 终止酶小亚基(TerS)将两个含有 pac 位点的双链 DNA 同源物并置,以衡量适合包装起始的串联体成熟度。N 端、C 端或两端修饰的融合 Ter S 蛋白保留功能。用编码更大(18-45 kDa)TerS-eGFP 和 TerS-mCherry 荧光融合蛋白的融合基因替换 T4 基因组中的 TerS 基因,表型没有明显变化。共感染和共表达编码 TerS-eGFP 和 TerS-mCherry 的 T4 噬菌体在感染的细菌中显示体内 FRET 与体外纯化、变性和复性的混合融合蛋白相当。体外低温和高温下纯化、变性-复性、混合温度敏感和天然 TerS 融合蛋白的 FRET 表明 TerS 环状寡聚物的形成对于体内功能至关重要。YOYO-1 染料和光活化 TerS-PAmCherry-C1 融合物的超分辨率 STORM 和 PALM 显微镜支持 TerS 二聚体或多个环状寡聚物结构的积累,这些结构包含 DNA 和 gp16-mCherry,在体内和体外调节 pac 位点切割。

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