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人类群体中的转录组变异及其在法医学中的潜在应用。

Transcriptome variation in human populations and its potential application in forensics.

机构信息

Institute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32, 60-479, Poznan, Poland.

出版信息

J Appl Genet. 2019 Nov;60(3-4):319-328. doi: 10.1007/s13353-019-00510-1. Epub 2019 Aug 10.

DOI:10.1007/s13353-019-00510-1
PMID:31401728
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6803616/
Abstract

This review presents the state-of-the-art in the forensic application of genetic methods driven by the research in population transcriptomics. In the first part of the review, the constraints of using classical genomic markers are shortly reviewed. In the second part, the developments in the field of inter-population diversity at the transcriptomic level are presented. Subsequently, a potential of population-specific transcriptomic markers in forensic science applications, including ascertaining population affiliation of human samples and cell mixtures separation, are presented.

摘要

这篇综述介绍了基于群体转录组学研究的遗传方法在法医学应用中的最新进展。在综述的第一部分,简要回顾了使用经典基因组标记的限制。在第二部分,介绍了转录组水平上的种间多样性的发展。随后,提出了群体特异性转录组标记在法医学应用中的潜力,包括确定人类样本和细胞混合物的种群归属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/6803616/a2a4966a0726/13353_2019_510_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/6803616/76b9bd9c4dda/13353_2019_510_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/6803616/a2a4966a0726/13353_2019_510_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/6803616/76b9bd9c4dda/13353_2019_510_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc55/6803616/a2a4966a0726/13353_2019_510_Fig2_HTML.jpg

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Enhanced DNA mixture deconvolution of sexual offense samples using the DEPArray™ system.利用 DEPArray™ 系统增强法医犯罪样本的 DNA 混合物解析。
Forensic Sci Int Genet. 2018 May;34:265-276. doi: 10.1016/j.fsigen.2018.03.001. Epub 2018 Mar 2.
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The Expanding Landscape of Alternative Splicing Variation in Human Populations.人类群体中可变剪接变异的扩展景观。
Am J Hum Genet. 2018 Jan 4;102(1):11-26. doi: 10.1016/j.ajhg.2017.11.002.
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Ancestry Informative Marker Panel to Estimate Population Stratification Using Genome-wide Human Array.使用全基因组人类芯片估计群体分层的祖先信息标记面板。
Ann Hum Genet. 2017 Nov;81(6):225-233. doi: 10.1111/ahg.12208. Epub 2017 Sep 11.
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Global variation in gene expression and the value of diverse sampling.基因表达的全球差异及多样采样的价值
Curr Opin Syst Biol. 2017 Feb;1:102-108. doi: 10.1016/j.coisb.2016.12.018. Epub 2017 Mar 3.
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Evaluation of forensic DNA mixture evidence: protocol for evaluation, interpretation, and statistical calculations using the combined probability of inclusion.法医DNA混合证据评估:使用包含概率组合进行评估、解释和统计计算的协议
BMC Genet. 2016 Aug 31;17(1):125. doi: 10.1186/s12863-016-0429-7.
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Massively parallel sequencing of short tandem repeats-Population data and mixture analysis results for the PowerSeq™ system.短串联重复序列的大规模平行测序——PowerSeq™ 系统的群体数据及混合分析结果
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Identification and evaluation of age-correlated DNA methylation markers for forensic use.用于法医学的年龄相关DNA甲基化标记物的鉴定与评估。
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