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在各种应激条件下,通过 PhoB 和应急(p)ppGpp 对全局基因调控进行调控重编。

Regulatory rewiring through global gene regulations by PhoB and alarmone (p)ppGpp under various stress conditions.

机构信息

Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India; Environmental Biotechnology and Genomics Division, National Environmental Engineering, Research Institute, CSIR-NEERI, Nagpur 440020, India.

Environmental Biotechnology and Genomics Division, National Environmental Engineering, Research Institute, CSIR-NEERI, Nagpur 440020, India.

出版信息

Microbiol Res. 2019 Oct;227:126309. doi: 10.1016/j.micres.2019.126309. Epub 2019 Aug 5.

Abstract

The phosphorus availability in soil ranged from <0.01 to 1 ppm and found limiting for the utilization by plants. Hence, phosphate solubilizing bacteria (PSB) proficiently fulfill the phosphorus requirement of plants in an eco-friendly manner. The PSB encounter dynamic and challenging environmental conditions viz., high temperature, osmotic, acid, and climatic changes often hamper their activity and proficiency. The modern trend is shifting from isolation of the PSB to their genetic potentials and genome annotation not only for their better performance in the field trials but also to study their ability to cope up with stresses. In order to withstand environmental stress, bacteria need to restructure its metabolic network to ensure its survival. Pi starving condition response regulator (PhoB) and the mediator of stringent stress response alarmone (p)ppGpp known to regulate the global regulatory network of bacteria to provide balanced physiology under various stress condition. The current review discusses the global regulation and crosstalk of genes involved in phosphorus homeostasis, solubilization, and various stress response to fine tune the bacterial physiology. The knowledge of these network crosstalk help bacteria to respond efficiently to the challenging environmental parameters, and their physiological plasticity lead us to develop proficient long-lasting consortia for plant growth promotion.

摘要

土壤中的磷有效性范围为<0.01 至 1ppm,发现对植物的利用有限。因此,解磷菌(PSB)能够以环保的方式满足植物的磷需求。PSB 遇到动态和具有挑战性的环境条件,如高温、渗透、酸和气候变化,这些条件常常会干扰它们的活性和效率。现代趋势正从 PSB 的分离转向其遗传潜力和基因组注释,不仅是为了提高其在田间试验中的性能,也是为了研究它们应对压力的能力。为了抵御环境压力,细菌需要重组其代谢网络以确保其生存。磷饥饿条件反应调节剂(PhoB)和严格胁迫反应警报素(p)ppGpp 被认为可以调节细菌的全局调控网络,以在各种胁迫条件下提供平衡的生理学。本综述讨论了参与磷稳态、溶解和各种应激反应的基因的全局调控和串扰,以调整细菌的生理学。这些网络串扰的知识有助于细菌有效地应对具有挑战性的环境参数,它们的生理可塑性使我们能够开发出高效、持久的促进植物生长的共生体。

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