Suppr超能文献

长链非编码RNA特征在膀胱癌中的预后价值

Prognostic value of long non-coding RNA signatures in bladder cancer.

作者信息

He Anbang, He Shiming, Peng Ding, Zhan Yonghao, Li Yifan, Chen Zhicong, Gong Yanqing, Li Xuesong, Zhou Liqun

机构信息

Department of Urology, Peking University First Hospital, Beijing 100034, China.

Institute of Urology, Peking University, Beijing 100034, China.

出版信息

Aging (Albany NY). 2019 Aug 20;11(16):6237-6251. doi: 10.18632/aging.102185.

Abstract

Bladder cancer (BLCA) is a devastating cancer whose early diagnosis can ensure better prognosis. Aim of this study was to evaluate the potential utility of lncRNAs in constructing lncRNA-based classifiers of BLCA prognosis and recurrence. Based on the data concerning BLCA retrieved from TCGA, lncRNA-based classifiers for OS and RFS were built using the least absolute shrinkage and selection operation (LASSO) Cox regression model in the training cohorts. More specifically, a 14-lncRNA-based classifier for OS and a 12-lncRNA-based classifier for RFS were constructed using the LASSO Cox regression. According to the prediction value, patients were divided into high/low-risk groups based on the cut-off of the median risk-score. The log-rank test showed significant differences in OS and RFS between low- and high-risk groups in the training, validation and whole cohorts. In the time-dependent ROC curve analysis, the AUCs for OS in the first, third, and fifth year were 0.734, 0.78, and 0.78 respectively, whereas the prediction capability of the 14-lncRNA classifier was superior to a previously published lncRNA classifier. As for the RFS, the AUCs in the first, third, and fifth year were 0.755, 0.715, and 0.740 respectively. In summary, the two-lncRNA-based classifiers could serve as novel and independent prognostic factors for OS and RFS individually.

摘要

膀胱癌(BLCA)是一种极具破坏性的癌症,早期诊断可确保更好的预后。本研究的目的是评估长链非编码RNA(lncRNAs)在构建基于lncRNA的膀胱癌预后和复发分类器中的潜在效用。基于从癌症基因组图谱(TCGA)检索到的有关膀胱癌的数据,在训练队列中使用最小绝对收缩和选择算子(LASSO)Cox回归模型构建了基于lncRNA的总生存期(OS)和无复发生存期(RFS)分类器。更具体地说,使用LASSO Cox回归构建了一个基于14个lncRNA的OS分类器和一个基于12个lncRNA的RFS分类器。根据预测值,根据中位风险评分的临界值将患者分为高/低风险组。对数秩检验显示,在训练、验证和整个队列中,低风险组和高风险组之间的OS和RFS存在显著差异。在时间依赖性ROC曲线分析中,第一年、第三年和第五年OS的曲线下面积(AUC)分别为0.734、0.78和0.78,而14个lncRNA分类器的预测能力优于先前发表的lncRNA分类器。至于RFS,第一年、第三年和第五年的AUC分别为0.755、0.715和0.740。总之,这两个基于lncRNA的分类器可分别作为OS和RFS新的独立预后因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e74/6738399/fbad762f2812/aging-11-102185-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验