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Machine Learning Methods for Histopathological Image Analysis.用于组织病理学图像分析的机器学习方法
Comput Struct Biotechnol J. 2018 Feb 9;16:34-42. doi: 10.1016/j.csbj.2018.01.001. eCollection 2018.
2
Wide-field tissue polarimetry allows efficient localized mass spectrometry imaging of biological tissues.宽视野组织偏振测定法可实现生物组织的高效局部质谱成像。
Chem Sci. 2016 Mar 1;7(3):2162-2169. doi: 10.1039/c5sc03782d. Epub 2015 Dec 15.
3
Classification of morphologically similar algae and cyanobacteria using Mueller matrix imaging and convolutional neural networks.利用穆勒矩阵成像和卷积神经网络对形态相似的藻类和蓝细菌进行分类。
Appl Opt. 2017 Aug 10;56(23):6520-6530. doi: 10.1364/AO.56.006520.
4
Quantification of collagen organization in histopathology samples using liquid crystal based polarization microscopy.使用基于液晶的偏振显微镜对组织病理学样本中的胶原组织进行定量分析。
Biomed Opt Express. 2017 Aug 29;8(9):4243-4256. doi: 10.1364/BOE.8.004243. eCollection 2017 Sep 1.
5
Quantitatively characterizing the microstructural features of breast ductal carcinoma tissues in different progression stages by Mueller matrix microscope.利用穆勒矩阵显微镜定量表征不同进展阶段乳腺导管癌组织的微观结构特征。
Biomed Opt Express. 2017 Jul 13;8(8):3643-3655. doi: 10.1364/BOE.8.003643. eCollection 2017 Aug 1.
6
Mueller polarimetric imaging for surgical and diagnostic applications: a review.用于手术和诊断应用的穆勒偏振成像:综述
J Biophotonics. 2017 Aug;10(8):950-982. doi: 10.1002/jbio.201600152. Epub 2017 May 2.
7
Polarization image segmentation of radiofrequency ablated porcine myocardial tissue.射频消融猪心肌组织的偏振图像分割
PLoS One. 2017 Apr 5;12(4):e0175173. doi: 10.1371/journal.pone.0175173. eCollection 2017.
8
Optimized Mass Spectrometry Analysis Workflow with Polarimetric Guidance for ex vivo and in situ Sampling of Biological Tissues.优化的质谱分析工作流程,具有偏振指导,用于生物组织的离体和原位采样。
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9
Changes of collagen ultrastructure in breast cancer tissue determined by second-harmonic generation double Stokes-Mueller polarimetric microscopy.利用二次谐波产生双斯托克斯-穆勒偏振显微镜测定乳腺癌组织中胶原超微结构的变化。
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10
Human pancreatic stellate cells modulate 3D collagen alignment to promote the migration of pancreatic ductal adenocarcinoma cells.人胰腺星状细胞调节三维胶原蛋白排列以促进胰腺导管腺癌细胞的迁移。
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一种用于立体变焦显微镜的多尺度穆勒偏振测量模块。

A multiscale Mueller polarimetry module for a stereo zoom microscope.

作者信息

Gribble Adam, Pinkert Michael A, Westreich Jared, Liu Yuming, Keikhosravi Adib, Khorasani Mohammadali, Nofech-Mozes Sharon, Eliceiri Kevin W, Vitkin Alex

机构信息

1Department of Medical Biophysics, University of Toronto, Toronto, Canada.

2Laboratory for Optical and Computational Instrumentation, Department of Biomedical Engineering, University of Wisconsin at Madison, Madison, USA.

出版信息

Biomed Eng Lett. 2019 Jun 20;9(3):339-349. doi: 10.1007/s13534-019-00116-w. eCollection 2019 Aug.

DOI:10.1007/s13534-019-00116-w
PMID:31456893
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6694365/
Abstract

Mueller polarimetry is a quantitative polarized light imaging modality that is capable of label-free visualization of tissue pathology, does not require extensive sample preparation, and is suitable for wide-field tissue analysis. It holds promise for selected applications in biomedicine, but polarimetry systems are often constrained by limited end-user accessibility and/or long-imaging times. In order to address these needs, we designed a multiscale-polarimetry module that easily couples to a commercially available stereo zoom microscope. This paper describes the module design and provides initial polarimetry imaging results from a murine preclinical breast cancer model and human breast cancer samples. The resultant polarimetry module has variable resolution and field of view, is low-cost, and is simple to switch in or out of a commercial microscope. The module can reduce long imaging times by adopting the main imaging approach used in pathology: scanning at low resolution to identify regions of interest, then at high resolution to inspect the regions in detail. Preliminary results show how the system can aid in region of interest identification for pathology, but also highlight that more work is needed to understand how tissue structures of pathological interest appear in Mueller polarimetry images across varying spatial zoom scales.

摘要

穆勒偏振测量法是一种定量偏振光成像方式,能够对组织病理学进行无标记可视化,无需进行大量样本制备,适用于宽视野组织分析。它在生物医学的特定应用中具有前景,但偏振测量系统往往受到终端用户可及性有限和/或成像时间长的限制。为了满足这些需求,我们设计了一个多尺度偏振测量模块,它可以轻松地与市售立体变焦显微镜耦合。本文描述了该模块的设计,并提供了来自小鼠临床前乳腺癌模型和人类乳腺癌样本的初始偏振测量成像结果。所得的偏振测量模块具有可变分辨率和视野,成本低,并且可以简单地在商用显微镜中切换接入或移除。该模块可以通过采用病理学中使用的主要成像方法来减少长时间成像:先以低分辨率扫描以识别感兴趣区域,然后以高分辨率检查这些区域的细节。初步结果表明该系统如何有助于病理学中感兴趣区域的识别,但也突出表明,需要开展更多工作来了解在不同空间变焦尺度下,病理学感兴趣的组织结构在穆勒偏振测量图像中是如何呈现的。