Department of Biotechnology, Ghent University, 9000, Ghent, Belgium.
International Potato Center (CIP), Lima, Peru.
Sci Rep. 2019 Aug 29;9(1):12584. doi: 10.1038/s41598-019-48691-3.
The discovery of the insertion of IbT-DNA1 and IbT-DNA2 into the cultivated (hexaploid) sweetpotato [Ipomoea batatas (L.) Lam.] genome constitutes a clear example of an ancient event of Horizontal Gene Transfer (HGT). However, it remains unknown whether the acquisition of both IbT-DNAs by the cultivated sweetpotato occurred before or after its speciation. Therefore, this study aims to evaluate the presence of IbT-DNAs in the genomes of sweetpotato's wild relatives belonging to the taxonomic group series Batatas. Both IbT-DNA1 and IbT-DNA2 were found in tetraploid I. batatas (L.) Lam. and had highly similar sequences and at the same locus to those found in the cultivated sweetpotato. Moreover, IbT-DNA1 was also found in I. cordatotriloba and I. tenuissima while IbT-DNA2 was detected in I. trifida. This demonstrates that genome integrated IbT-DNAs are not restricted to the cultivated sweetpotato but are also present in tetraploid I. batatas and other related species.
IbT-DNA1 和 IbT-DNA2 插入栽培(六倍体)番薯 [Ipomoea batatas (L.) Lam.] 基因组的发现构成了水平基因转移(HGT)的一个古老事件的明确例证。然而,尚不清楚栽培番薯同时获得这两个 IbT-DNAs 是在其物种形成之前还是之后。因此,本研究旨在评估 IbT-DNAs 在属于 Batatas 分类群系列的番薯野生近缘种基因组中的存在。在四倍体 I. batatas (L.) Lam. 中发现了 IbT-DNA1 和 IbT-DNA2,它们的序列高度相似,位于与在栽培番薯中发现的相同位置。此外,在 I. cordatotriloba 和 I. tenuissima 中发现了 IbT-DNA1,而在 I. trifida 中检测到了 IbT-DNA2。这表明整合到基因组中的 IbT-DNAs 不仅局限于栽培番薯,也存在于四倍体 I. batatas 和其他相关物种中。