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基因组分析揭示了分离自工业废水沉积物的假单胞菌 P11 对重金属抗性的潜在机制。

Genome Analysis Revealing the Potential Mechanisms for the Heavy Metal Resistance of Pseudomonas sp. P11, Isolated from Industrial Wastewater Sediment.

机构信息

Hubei Key Laboratory of Edible Wild Plants Conservation and Utilization & College of Life Sciences, Hubei Normal University, Huangshi, 435002, Hubei, People's Republic of China.

出版信息

Curr Microbiol. 2019 Nov;76(11):1361-1368. doi: 10.1007/s00284-019-01728-2. Epub 2019 Aug 29.

Abstract

Pseudomonas sp. P11 was isolated from the industrial wastewater sediment nearby the Daye Non-ferrous Metals Company, China. This strain possesses the ability to resist various heavy metals and efficiently precipitate arsenic. We here present a summary classification and a set of features of Pseudomonas sp. P11, together with the description of the genomic sequencing and annotation. The genomic sequence is 6,644,817 bp with a G+C content of 62.20% and contains 6143 protein-coding genes, 250 pseudo genes, and 76 tRNAs/rRNAs genes. Operons and gene clusters responsible for multiple heavy metal tolerance or detoxification were identified and accounted for the observed resistance phenotypes. Phylogenetic analysis revealed that the paralogous arsenic resistant genes possess different evolutionary paths. This study provides important insights to illuminate the versatility and adaptation of this strain to the heavy metal-contaminated environment.

摘要

从中国大冶有色金属公司附近的工业废水沉积物中分离到一株假单胞菌 P11。该菌株具有抵抗各种重金属和有效沉淀砷的能力。我们在这里对假单胞菌 P11 进行了简要分类和特征描述,并介绍了基因组测序和注释。基因组序列为 6644817bp,GC 含量为 62.20%,包含 6143 个蛋白编码基因、250 个伪基因和 76 个 tRNA/rRNA 基因。鉴定出了负责多种重金属耐受或解毒的操纵子和基因簇,这些基因簇解释了观察到的耐药表型。系统发育分析表明,砷抗性基因的旁系同源基因具有不同的进化路径。本研究为阐明该菌株对重金属污染环境的多功能性和适应性提供了重要的见解。

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