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龋齿:遗传与蛋白质的相互作用。

Dental caries: Genetic and protein interactions.

机构信息

Graduate Program in Dentistry, Dentistry Department, School of Life Sciences, Pontifícia Universidade Católica do Paraná, Rua Imaculada Conceição 1155, Curitiba, Paraná, Brazil, 80215-901.

Graduate Program in Health Sciences (PPGCS), School of Medicine, Pontifícia Universidade Católica do Paraná (PUCPR), Rua Imaculada Conceição 1155, Curitiba, Paraná, Brazil, 80215-901; Informatics Department, Universidade Estadual de Ponta Grossa (UEPG), Paraná, Brazil, 84030-900.

出版信息

Arch Oral Biol. 2019 Dec;108:104522. doi: 10.1016/j.archoralbio.2019.104522. Epub 2019 Aug 15.

Abstract

OBJECTIVE

To present a genetic and protein interaction analysis associated with dental caries.

MATERIAL AND METHODS

The first step was to conduct a systematic literature review (SLR) through an electronic database search. Case-controls that reported associations between genes and dental caries were the main type of study design used as inclusion criteria, retrieved from the PubMed and the Virtual Health Library databases, comprising the chronological range from 1982 to 2017. The SLR was guided by PRISMA protocol and the methodological quality of the studies was established through Newcastle-Ottawa Scale (NOS). In the second step, the String Protein Interaction (SPI) approach was used to analyze protein interaction (by esyN software) and also the Ingenuity Pathway Analysis (IPA) to check biological pathways associated with dental caries genes.

RESULTS

A total of 51 articles were included to perform this SLR, describing a number of 27 genes associated with dental caries development. At the genetic level, 23 genes have at least one other gene with which they interact. The genes TUFT1, VDR, TFIP11, LTF, HLA-DRB1, MMP2, MMP3 and MUC5B were shown to be connected in interactive networks by at least 10 other genes.

CONCLUSION

It is essential to apprehend the multifactorial pattern of inheritance in human disease. This study presents pathways which may be directly correlated with several dental caries phenotype and this contributes to a better understanding of this disease, opening up a wider range of biotechnology options for its effective control in the future.

摘要

目的

呈现与龋齿相关的遗传和蛋白质相互作用分析。

材料和方法

第一步是通过电子数据库搜索进行系统文献综述(SLR)。纳入标准为报告基因与龋齿之间存在关联的病例对照研究设计,检索自 PubMed 和 Virtual Health Library 数据库,时间范围从 1982 年至 2017 年。SLR 遵循 PRISMA 协议,并通过 Newcastle-Ottawa 量表(NOS)确定研究的方法学质量。第二步,使用 String 蛋白质相互作用(SPI)方法分析蛋白质相互作用(通过 esyN 软件),并使用 IPA 检查与龋齿基因相关的生物学途径。

结果

共纳入 51 篇文章进行 SLR,描述了 27 个与龋齿发展相关的基因。在遗传水平上,有 23 个基因至少与另一个基因相互作用。TUFT1、VDR、TFIP11、LTF、HLA-DRB1、MMP2、MMP3 和 MUC5B 这 6 个基因通过至少 10 个其他基因显示出相互作用网络的连接。

结论

了解人类疾病的多因素遗传模式至关重要。本研究提出了可能与多种龋齿表型直接相关的途径,这有助于更好地理解这种疾病,并为未来有效控制该疾病开辟了更广泛的生物技术选择。

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