• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过计算建模预测神经母细胞瘤中PD-L1的表达

Prediction of PD-L1 Expression in Neuroblastoma via Computational Modeling.

作者信息

Lombardo Salvo Danilo, Presti Mario, Mangano Katia, Petralia Maria Cristina, Basile Maria Sofia, Libra Massimo, Candido Saverio, Fagone Paolo, Mazzon Emanuela, Nicoletti Ferdinando, Bramanti Alessia

机构信息

Department of Biomedical and Biotechnological Sciences, University of Catania, 95123- Catania, Italy.

IRCCS (Istituti di Ricovero e Cura a Carattere Scientifico) Centro Neurolesi Bonino Pulejo, C.da Casazza, 98124- Messina, Italy.

出版信息

Brain Sci. 2019 Aug 31;9(9):221. doi: 10.3390/brainsci9090221.

DOI:10.3390/brainsci9090221
PMID:31480495
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6770763/
Abstract

Immunotherapy is a promising new therapeutic approach for neuroblastoma (NBM): an anti-GD2 vaccine combined with orally administered soluble beta-glucan is undergoing a phase II clinical trial and nivolumab and ipilimumab are being tested in recurrent and refractory tumors. Unfortunately, predictive biomarkers of response to immunotherapy are currently not available for NBM patients. The aim of this study was to create a computational network model simulating the different intracellular pathways involved in NBM, in order to predict how the tumor phenotype may be influenced to increase the sensitivity to anti-programmed cell death-ligand-1 (PD-L1)/programmed cell death-1 (PD-1) immunotherapy. The model runs on COPASI software. In order to determine the influence of intracellular signaling pathways on the expression of PD-L1 in NBM, we first developed an integrated network of protein kinase cascades. Michaelis-Menten kinetics were associated to each reaction in order to tailor the different enzymes kinetics, creating a system of ordinary differential equations (ODEs). The data of this study offers a first tool to be considered in the therapeutic management of the NBM patient undergoing immunotherapeutic treatment.

摘要

免疫疗法是神经母细胞瘤(NBM)一种很有前景的新治疗方法:一种抗GD2疫苗联合口服可溶性β-葡聚糖正在进行II期临床试验,纳武单抗和伊匹单抗正在复发性和难治性肿瘤中进行测试。不幸的是,目前NBM患者尚无免疫疗法反应的预测生物标志物。本研究的目的是创建一个计算网络模型,模拟NBM中涉及的不同细胞内途径,以预测肿瘤表型如何受到影响,从而提高对抗程序性细胞死亡配体1(PD-L1)/程序性细胞死亡1(PD-1)免疫疗法的敏感性。该模型在COPASI软件上运行。为了确定细胞内信号通路对NBM中PD-L1表达的影响,我们首先构建了一个蛋白激酶级联的整合网络。将米氏动力学与每个反应相关联,以调整不同酶的动力学,创建一个常微分方程(ODE)系统。本研究的数据为接受免疫治疗的NBM患者的治疗管理提供了首个可考虑的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/df354bb5bb6e/brainsci-09-00221-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/4fabf1ddb4fd/brainsci-09-00221-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/9e6cf171c8fc/brainsci-09-00221-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/ecb27af7649f/brainsci-09-00221-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/4125470e3888/brainsci-09-00221-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/df354bb5bb6e/brainsci-09-00221-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/4fabf1ddb4fd/brainsci-09-00221-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/9e6cf171c8fc/brainsci-09-00221-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/ecb27af7649f/brainsci-09-00221-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/4125470e3888/brainsci-09-00221-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/362f/6770763/df354bb5bb6e/brainsci-09-00221-g005.jpg

相似文献

1
Prediction of PD-L1 Expression in Neuroblastoma via Computational Modeling.通过计算建模预测神经母细胞瘤中PD-L1的表达
Brain Sci. 2019 Aug 31;9(9):221. doi: 10.3390/brainsci9090221.
2
Through Predictive Personalized Medicine.通过预测性个性化医疗。
Brain Sci. 2020 Aug 28;10(9):594. doi: 10.3390/brainsci10090594.
3
The Progress of Immunotherapy in Refractory Pituitary Adenomas and Pituitary Carcinomas.免疫治疗在难治性垂体腺瘤和垂体癌中的进展。
Front Endocrinol (Lausanne). 2020 Dec 11;11:608422. doi: 10.3389/fendo.2020.608422. eCollection 2020.
4
The Next Immune-Checkpoint Inhibitors: PD-1/PD-L1 Blockade in Melanoma.下一代免疫检查点抑制剂:黑色素瘤中的PD-1/PD-L1阻断
Clin Ther. 2015 Apr 1;37(4):764-82. doi: 10.1016/j.clinthera.2015.02.018. Epub 2015 Mar 29.
5
Genomics of NSCLC patients both affirm PD-L1 expression and predict their clinical responses to anti-PD-1 immunotherapy.非小细胞肺癌患者的基因组学既可以证实 PD-L1 的表达,又可以预测其对抗 PD-1 免疫治疗的临床反应。
BMC Cancer. 2018 Feb 27;18(1):225. doi: 10.1186/s12885-018-4134-y.
6
First-Line Nivolumab Plus Ipilimumab in Advanced Non-Small-Cell Lung Cancer (CheckMate 568): Outcomes by Programmed Death Ligand 1 and Tumor Mutational Burden as Biomarkers.纳武利尤单抗联合伊匹单抗一线治疗晚期非小细胞肺癌(CheckMate 568):程序性死亡配体 1 和肿瘤突变负荷作为生物标志物的结果。
J Clin Oncol. 2019 Apr 20;37(12):992-1000. doi: 10.1200/JCO.18.01042. Epub 2019 Feb 20.
7
PD-1 blockade augments anti-neuroblastoma immune response induced by anti-GD antibody ch14.18/CHO.程序性死亡蛋白-1(PD-1)阻断增强了抗神经母细胞瘤免疫反应,该反应由抗GD抗体ch14.18/CHO诱导。
Oncoimmunology. 2017 Jul 5;6(10):e1343775. doi: 10.1080/2162402X.2017.1343775. eCollection 2017.
8
Systemic Analysis and Review of Nivolumab-ipilimumab Combination as a Rescue Strategy for Renal Cell Carcinoma After Treatment With Anti-PD-1/PD-L1 Therapy.纳武利尤单抗联合伊匹木单抗作为抗 PD-1/PD-L1 治疗后肾细胞癌挽救策略的系统分析和综述。
Clin Genitourin Cancer. 2021 Apr;19(2):95-102. doi: 10.1016/j.clgc.2020.10.004. Epub 2020 Oct 15.
9
The impact of PD-L1 as a biomarker of cancer responses to combo anti-PD-1/CTLA-4.PD-L1 作为癌症对联合抗 PD-1/CTLA-4 反应的生物标志物的影响。
Pathol Res Pract. 2023 Jul;247:154583. doi: 10.1016/j.prp.2023.154583. Epub 2023 May 29.
10
Combined Blockade of TIGIT and PD-L1 Enhances Anti-Neuroblastoma Efficacy of GD2-Directed Immunotherapy with Dinutuximab Beta.TIGIT和PD-L1联合阻断增强了地努图昔单抗β介导的GD2导向免疫疗法治疗神经母细胞瘤的疗效。
Cancers (Basel). 2023 Jun 23;15(13):3317. doi: 10.3390/cancers15133317.

引用本文的文献

1
Interplay Between the Epigenome, the Microenvironment, and the Immune System in Neuroblastoma.神经母细胞瘤中表观基因组、微环境与免疫系统之间的相互作用
Cancers (Basel). 2025 May 29;17(11):1812. doi: 10.3390/cancers17111812.
2
Multicellular model of neuroblastoma proposes unconventional therapy based on multiple roles of p53.神经母细胞瘤的多细胞模型基于p53的多种作用提出了非常规疗法。
PLoS Comput Biol. 2024 Dec 23;20(12):e1012648. doi: 10.1371/journal.pcbi.1012648. eCollection 2024 Dec.
3
Revisiting Neuroblastoma: Nrf2, NF-κB and Phox2B as a Promising Network in Neuroblastoma.

本文引用的文献

1
Retrospective follow-up analysis of the transcriptomic patterns of cytokines, cytokine receptors and chemokines at preconception and during pregnancy, in women with post-partum depression.产后抑郁症女性孕前及孕期细胞因子、细胞因子受体和趋化因子转录组模式的回顾性随访分析
Exp Ther Med. 2019 Sep;18(3):2055-2062. doi: 10.3892/etm.2019.7774. Epub 2019 Jul 12.
2
Upregulation of IL-1 Receptor Antagonist in a Mouse Model of Migraine.偏头痛小鼠模型中白细胞介素-1受体拮抗剂的上调
Brain Sci. 2019 Jul 19;9(7):172. doi: 10.3390/brainsci9070172.
3
The analysis of miRNA expression profiling datasets reveals inverse microRNA patterns in glioblastoma and Alzheimer's disease.
再探神经母细胞瘤:Nrf2、NF-κB和Phox2B作为神经母细胞瘤中有前景的网络
Curr Issues Mol Biol. 2024 Apr 6;46(4):3193-3208. doi: 10.3390/cimb46040200.
4
A Comprehensive Computational Insight into the PD-L1 Binding to PD-1 and Small Molecules.对程序性死亡配体1(PD-L1)与程序性死亡受体1(PD-1)及小分子结合的全面计算洞察
Pharmaceuticals (Basel). 2024 Feb 28;17(3):316. doi: 10.3390/ph17030316.
5
Predicting Neuroblastoma Patient Risk Groups, Outcomes, and Treatment Response Using Machine Learning Methods: A Review.使用机器学习方法预测神经母细胞瘤患者的风险组、结局和治疗反应:综述。
Med Sci (Basel). 2024 Jan 6;12(1):5. doi: 10.3390/medsci12010005.
6
Mathematical Model of Clonal Evolution Proposes a Personalised Multi-Modal Therapy for High-Risk Neuroblastoma.克隆进化的数学模型提出了一种针对高危神经母细胞瘤的个性化多模式疗法。
Cancers (Basel). 2023 Mar 26;15(7):1986. doi: 10.3390/cancers15071986.
7
Computational Approaches Drive Developments in Immune-Oncology Therapies for PD-1/PD-L1 Immune Checkpoint Inhibitors.计算方法推动 PD-1/PD-L1 免疫检查点抑制剂免疫肿瘤疗法的发展。
Int J Mol Sci. 2023 Mar 21;24(6):5908. doi: 10.3390/ijms24065908.
8
Transcriptomic Data Analysis Reveals a Down-Expression of in Schizophrenia Hippocampus.转录组数据分析揭示精神分裂症海马体中[此处原文缺失具体内容]的表达下调。
Brain Sci. 2021 Jul 23;11(8):973. doi: 10.3390/brainsci11080973.
9
Personalized Medicine for Neuroblastoma: Moving from Static Genotypes to Dynamic Simulations of Drug Response.神经母细胞瘤的个性化医学:从静态基因型转向药物反应的动态模拟
J Pers Med. 2021 May 11;11(5):395. doi: 10.3390/jpm11050395.
10
Transcriptomic analysis of COVID‑19 lungs and bronchoalveolar lavage fluid samples reveals predominant B cell activation responses to infection.新冠病毒感染患者肺及支气管肺泡灌洗液样本的转录组分析显示,感染后主要表现为 B 细胞激活反应。
Int J Mol Med. 2020 Oct;46(4):1266-1273. doi: 10.3892/ijmm.2020.4702. Epub 2020 Aug 12.
miRNA 表达谱数据集的分析揭示了胶质母细胞瘤和阿尔茨海默病中 miRNA 模式的反转。
Oncol Rep. 2019 Sep;42(3):911-922. doi: 10.3892/or.2019.7215. Epub 2019 Jun 28.
4
Characterization of the Pathophysiological Role of CD47 in Uveal Melanoma.CD47 在葡萄膜黑色素瘤中的病理生理作用特征。
Molecules. 2019 Jul 4;24(13):2450. doi: 10.3390/molecules24132450.
5
Identification of CD4+ T cell biomarkers for predicting the response of patients with relapsing‑remitting multiple sclerosis to natalizumab treatment.鉴定 CD4+T 细胞生物标志物,预测复发缓解型多发性硬化症患者对那他珠单抗治疗的反应。
Mol Med Rep. 2019 Jul;20(1):678-684. doi: 10.3892/mmr.2019.10283. Epub 2019 May 23.
6
Prevention of clinical and histological signs of MOG-induced experimental allergic encephalomyelitis by prolonged treatment with recombinant human EGF.通过长期使用重组人表皮生长因子治疗预防 MOG 诱导的实验性过敏性脑脊髓炎的临床和组织学征象。
J Neuroimmunol. 2019 Jul 15;332:224-232. doi: 10.1016/j.jneuroim.2019.05.006. Epub 2019 May 8.
7
Differential modulation and prognostic values of immune-escape genes in uveal melanoma.葡萄膜黑色素瘤中免疫逃逸基因的差异调节及其预后价值。
PLoS One. 2019 Jan 17;14(1):e0210276. doi: 10.1371/journal.pone.0210276. eCollection 2019.
8
CAR T Cell Therapy for Neuroblastoma.嵌合抗原受体 T 细胞疗法治疗神经母细胞瘤。
Front Immunol. 2018 Oct 16;9:2380. doi: 10.3389/fimmu.2018.02380. eCollection 2018.
9
Manipulation of the Immune System for Cancer Defeat: A Focus on the T Cell Inhibitory Checkpoint Molecules.操纵免疫系统以战胜癌症:聚焦于 T 细胞抑制性检查点分子。
Curr Med Chem. 2020;27(15):2402-2448. doi: 10.2174/0929867325666181106114421.
10
Overexpression of macrophage migration inhibitory factor and functionally-related genes, D-DT, CD74, CD44, CXCR2 and CXCR4, in glioblastoma.巨噬细胞移动抑制因子及功能相关基因D-DT、CD74、CD44、CXCR2和CXCR4在胶质母细胞瘤中的过表达
Oncol Lett. 2018 Sep;16(3):2881-2886. doi: 10.3892/ol.2018.8990. Epub 2018 Jun 19.