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在最适或次适温度下生长的五种拟南芥生态型的表型分析和细胞壁多糖组成数据集。

Phenotyping and cell wall polysaccharide composition dataset of five arabidopsis ecotypes grown at optimal or sub-optimal temperatures.

作者信息

Duruflé Harold, Albenne Cécile, Jamet Elisabeth, Dunand Christophe

机构信息

Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24 chemin de Borde Rouge, Auzeville, BP42617, 31326, Castanet Tolosan, France.

出版信息

Data Brief. 2019 Jul 26;25:104318. doi: 10.1016/j.dib.2019.104318. eCollection 2019 Aug.

DOI:10.1016/j.dib.2019.104318
PMID:31489348
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6717163/
Abstract

This article presents experimental data describing the morphology and the cell wall monosaccharide content of rosettes and flower stems of five ecotypes grown at two contrasted temperatures. Besides, cell wall polysaccharides are reconstructed from data of monosaccharide quantification. The well-described and sequenced Columbia (Col) ecotype and four newly-described Pyrenees ecotypes (Duruflé et al., 2019) have been grown at two different temperatures (15 °C and 22 °C). For macrophenotyping, we provide dataset regarding (i) rosettes such as measurement of diameter and fresh mass as well as number of leaves just before bolting and (ii) floral stems at the first flower stage such as length, number of cauline leaves, mass and diameter at its base. Regarding cell wall composition, we provide data of quantification of seven monosaccharides and the reconstruction three polysaccharides. All these data are markers to differentiate both growth temperatures and the different ecotypes. They constitute a valuable resource for the community to study the adaptation of ecotypes to sub-optimal temperature growth conditions.

摘要

本文展示了实验数据,描述了在两种不同温度下生长的五种生态型莲座叶丛和花茎的形态以及细胞壁单糖含量。此外,根据单糖定量数据重建了细胞壁多糖。已对描述详尽且测序完成的哥伦比亚(Col)生态型和四种新描述的比利牛斯生态型(迪吕弗莱等人,2019年)在两种不同温度(15°C和22°C)下进行了培养。对于宏观表型分析,我们提供了关于以下方面的数据集:(i)莲座叶丛,例如抽薹前的直径、鲜重以及叶片数量的测量数据;(ii)第一花期的花茎,例如长度、茎生叶数量、质量及其基部直径。关于细胞壁组成,我们提供了七种单糖的定量数据以及三种多糖的重建数据。所有这些数据都是区分两种生长温度和不同生态型的标志物。它们构成了一种宝贵资源,供学界研究生态型对次优温度生长条件的适应性。

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Transcriptomic and cell wall proteomic datasets of rosettes and floral stems from five ecotypes grown at optimal or sub-optimal temperature.在最佳或次优温度下生长的五种生态型的莲座叶丛和花茎的转录组学和细胞壁蛋白质组学数据集。
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本文引用的文献

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Front Plant Sci. 2019 Apr 9;10:430. doi: 10.3389/fpls.2019.00430. eCollection 2019.
2
Cell wall modifications of two Arabidopsis thaliana ecotypes, Col and Sha, in response to sub-optimal growth conditions: An integrative study.两种拟南芥生态型(Col和Sha)响应次优生长条件时的细胞壁修饰:一项综合研究。
Plant Sci. 2017 Oct;263:183-193. doi: 10.1016/j.plantsci.2017.07.015. Epub 2017 Jul 20.
3
NIH Image to ImageJ: 25 years of image analysis.NIH 图像到 ImageJ:25 年的图像分析。
Nat Methods. 2012 Jul;9(7):671-5. doi: 10.1038/nmeth.2089.
4
Comparative study of the cell wall composition of broccoli, carrot, and tomato: structural characterization of the extractable pectins and hemicelluloses.比较西兰花、胡萝卜和番茄细胞壁成分的研究:可提取果胶和半纤维素的结构特征。
Carbohydr Res. 2011 Jul 1;346(9):1105-11. doi: 10.1016/j.carres.2011.04.014. Epub 2011 Apr 13.
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Evaluation of cell wall preparations for proteomics: a new procedure for purifying cell walls from Arabidopsis hypocotyls.用于蛋白质组学的细胞壁制剂评估:一种从拟南芥下胚轴中纯化细胞壁的新方法。
Plant Methods. 2006 May 27;2:10. doi: 10.1186/1746-4811-2-10.
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Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.基于生长阶段的拟南芥表型分析:植物高通量功能基因组学的一个模型
Plant Cell. 2001 Jul;13(7):1499-510. doi: 10.1105/tpc.010011.