Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Via Ponte Pietro Bucci, 87036, Arcavacata di Rende (CS), Italy.
UCIBIO, REQUIMTE, Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s/n, 4169-007, Porto, Portugal.
Chemphyschem. 2019 Nov 5;20(21):2881-2886. doi: 10.1002/cphc.201900650. Epub 2019 Sep 11.
We have computationally determined the catalytic mechanism of human transketolase (hTK) using a cluster model approach and density functional theory calculations. We were able to determine all the relevant structures, bringing solid evidences to the proposed experimental mechanism, and to add important detail to the structure of the transition states and the energy profile associated with catalysis. Furthermore, we have established the existence of a crucial intermediate of the catalytic cycle, in agreement with experiments. The calculated data brought new insights to hTK's catalytic mechanism, providing free-energy values for the chemical reaction, as well as adding atomistic detail to the experimental mechanism.
我们使用簇模型方法和密度泛函理论计算计算确定了人转酮醇酶(hTK)的催化机制。我们能够确定所有相关的结构,为提出的实验机制提供确凿的证据,并为过渡态的结构和与催化相关的能量分布添加重要细节。此外,我们还确定了催化循环中一个关键中间产物的存在,与实验结果一致。计算数据为 hTK 的催化机制提供了新的见解,为化学反应提供了自由能值,并为实验机制添加了原子细节。