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新种,一种新型的原核捕食者,分离自中国沿海海水。

sp. nov., a novel prokaryotic predator isolated from coastal seawater of China.

机构信息

College of Chemical Engineering, Huaqiao University, 668 Jimei Road, Fujian Xiamen 361021, PR China.

Key Laboratory of Chemical Biology and Molecular Engineering (Huaqiao University), Fujian Province University, 668 Jimei Road, Fujian Xiamen 361021, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Dec;69(12):3917-3923. doi: 10.1099/ijsem.0.003703.

Abstract

Three prokaryotic predator strains, BL9, BL10 and BL28, were isolated with from coastal seawater of PR China. Cells of the strains were Gram-negative, vibrioid-shaped and motile with a single sheathed flagellum (25-28 nm wide). Cells were around 0.3×0.5-1.0 µm in size. The three strains were obligate predators that exhibited a biphasic life cycle: a free-swimming attack phase and an intraperiplasmic growth phase within the prey. Bdelloplasts were formed. NaCl was required for growth. Optimum growth occurred at ~37 °C, with 2-4 % (w/v) NaCl and at pH 7.0-8.0. The results of phylogenetic analyses based on 16S rRNA gene sequences indicated that the three strains shared 99.9 % similarity to each other, were affiliated with the genus in the class , and represented the same new species. Strain BL9 (=MCCC 1K03527=JCM 32962) was designated as the type strain. Genome sequencing of strain BL9 revealed a genome size of 3.14 Mb and a G+C content of 35.8 mol%. The estimated digital DNA-DNA hybridization (dDDH) values and the whole genome average nucleotide identity (gANI) values between the genome of strain BL9 and those of and were 12.5-19 and 63.49-76.15 %, respectively. On the basis of life cycle features, results of physiological analyses, gANI data and dDDH data, strain BL9 represents a new species within the genus , for which the name sp. nov. is proposed.

摘要

从中国沿海海水中分离到三株原核捕食菌 BL9、BL10 和 BL28。菌株细胞革兰氏阴性,弧菌状,运动,有单根鞘鞭毛(25-28nm 宽)。细胞大小约为 0.3×0.5-1.0µm。三株菌均为专性捕食菌,表现出双相生活史:自由游动的攻击阶段和在猎物内部的周质内生长阶段。形成了蛭弧体。生长需要 NaCl。最适生长温度为~37°C,NaCl 浓度为 2-4%(w/v),pH 值为 7.0-8.0。基于 16S rRNA 基因序列的系统发育分析结果表明,三株菌彼此间相似度为 99.9%,与属内的属 同属,代表同一新种。菌株 BL9(=MCCC 1K03527=JCM 32962)被指定为模式菌株。BL9 株的基因组测序显示,基因组大小为 3.14Mb,G+C 含量为 35.8mol%。估计的数字 DNA-DNA 杂交(dDDH)值和基因组平均核苷酸同一性(gANI)值与 属和 属的基因组之间的差异分别为 12.5-19 和 63.49-76.15%。基于生活史特征、生理分析结果、gANI 数据和 dDDH 数据,菌株 BL9 代表了属内的一个新种,建议将其命名为 sp. nov.。

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