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通过免疫信息学和分子动力学模拟预测 MAYV 肽抗原用于免疫诊断试验。

Prediction of MAYV peptide antigens for immunodiagnostic tests by immunoinformatics and molecular dynamics simulations.

机构信息

Universidade Federal de Goiás, Laboratório de Virologia, Jataí, GO, 75801-615, Brazil.

Universidade Federal de Goiás, Núcleo Colaborativo de BioSistemas, Jataí, GO, 75801-615, Brazil.

出版信息

Sci Rep. 2019 Sep 16;9(1):13339. doi: 10.1038/s41598-019-50008-3.

Abstract

The Mayaro virus is endemic to South America, and the possible involvement of Aedes spp. mosquitoes in its transmission is a risk factor for outbreaks of greater proportions. The virus causes a potentially disabling illness known as Mayaro fever, which is similar to that caused by the chikungunya virus. The cocirculation of both viruses, with their clinical and structural similarities, and the absence of prophylactic and therapeutic measures highlight the need for studies that seek to understand the Mayaro virus. Using approaches in silico, we identified an antigenic and specific epitope (p_MAYV4) in domain A of the E2 glycoprotein of the Mayaro virus. This epitope was theoretically predicted to be stable and exposed on the surface of the protein, where it showed key properties that enable its interaction with neutralizing antibodies. These characteristics make it an interesting target for the development of immunodiagnostic platforms. Molecular dynamics simulation-based structural analysis showed that the PHE95 residue in the E1 fusion loop region is conserved among Alphavirus family members. PHE95 interacts with the hydrophobic residues of the E2 glycoprotein to form a cage-shaped structure that is critical to assemble and stabilize the E1/E2 heterodimer. These results provide important insights useful for the advancement of diagnostic platforms and the study of therapeutic alternatives.

摘要

马亚罗病毒流行于南美洲,埃及伊蚊可能在其传播中起作用,这是暴发更大规模疫情的一个风险因素。该病毒会引起一种潜在的使人致残的疾病,称为马亚罗热,类似于基孔肯雅热病毒引起的疾病。两种病毒的共同流行,其临床和结构相似性,以及缺乏预防和治疗措施,突出表明需要开展研究以了解马亚罗病毒。我们采用计算机模拟方法,在马亚罗病毒 E2 糖蛋白的 A 结构域中鉴定出一个抗原和特定的表位(p_MAYV4)。该表位理论上被预测为稳定且暴露在蛋白质表面,在那里它表现出关键特性,使其能够与中和抗体相互作用。这些特性使其成为免疫诊断平台开发的一个有趣目标。基于分子动力学模拟的结构分析表明,在甲型病毒科成员中,E1 融合环区域的 PHE95 残基是保守的。PHE95 与 E2 糖蛋白的疏水性残基相互作用,形成一个笼状结构,对于组装和稳定 E1/E2 异源二聚体至关重要。这些结果为推进诊断平台和研究治疗替代方案提供了重要的见解。

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