Institute of Medical Microbiology, Jena University Hospital, Jena, Germany.
Institute of Hygiene and National Consulting Laboratory for Hemolytic Uremic Syndrome (HUS), University Hospital Münster, Münster, Germany.
Eur J Clin Microbiol Infect Dis. 2020 Jan;39(1):151-158. doi: 10.1007/s10096-019-03704-x. Epub 2019 Sep 16.
Shiga toxin-producing Escherichia coli (STEC) and Shigella spp./enteroinvasive E. coli (EIEC) are common diarrheagenic bacteria that cause sporadic diseases and outbreaks. Clinical manifestations vary from mild symptoms to severe complications. For microbiological diagnosis, culture confirmation of a positive stool screening PCR test is challenging because of time-consuming methods for isolation of strains, wide variety of STEC pathotypes, and increased emergence of non-classical strains with unusual serotypes. Therefore, molecular assays for the rapid identification of suspect colonies growing on selective media are very useful. In this study, the performance of the newly introduced eazyplex® EHEC assay based on loop-mediated isothermal amplification (LAMP) was evaluated using 18 representative STEC and Shigella strains and 31 isolates or positive-enrichment broths that were collected from clinical stool samples following screening by BD MAX™ EBP PCR. Results were compared to real-time PCR as a reference standard. Overall, sensitivities and specificities of the eazyplex® EHEC were as follows: 94.7% and 100% for Shiga toxin 1 (stx1), 100% and 100% for stx2, 93.3% and 97.1% for intimin (eae), 100% and 100% for enterohemolysin A (ehlyA), and 100% and 100% for invasion-associated plasmid antigen H (ipaH) as Shigella spp./EIEC target, respectively. Sample preparation for LAMP took only some minutes, and the time to result of the assay ranged from 8.5 to 13 min. This study shows that eazyplex® EHEC is a very fast and easy to perform molecular assay that provides reliable results as a culture confirmation assay for the diagnosis of STEC and Shigella spp./EIEC infections.
产志贺毒素大肠杆菌(STEC)和志贺氏菌/侵袭性大肠杆菌(EIEC)是常见的腹泻性致病菌,可引起散发性疾病和暴发疫情。临床表现从轻度症状到严重并发症不等。对于微生物学诊断,由于菌株分离的耗时方法、STEC 病原体的广泛多样性以及非典型血清型的非经典菌株的增加,阳性粪便筛选 PCR 检测的培养确认具有挑战性。因此,用于快速鉴定选择性培养基上可疑菌落的分子检测非常有用。在这项研究中,使用 18 株代表性 STEC 和志贺氏菌菌株以及 31 株从临床粪便样本中筛选后收集的分离株或阳性富集肉汤,评估了新引入的基于环介导等温扩增(LAMP)的 eazyplex® EHEC 检测的性能,BD MAX™ EBP PCR。结果与实时 PCR 作为参考标准进行比较。总体而言,eazyplex® EHEC 的敏感性和特异性如下:stx1 为 94.7%和 100%,stx2 为 100%和 100%,eae 为 93.3%和 97.1%,ehlyA 为 100%和 100%,ipaH 为 100%和 100%作为志贺氏菌/ EIEC 目标。LAMP 的样品制备仅需几分钟,检测的结果时间范围为 8.5 至 13 分钟。这项研究表明,eazyplex® EHEC 是一种非常快速且易于操作的分子检测方法,可作为 STEC 和志贺氏菌/ EIEC 感染诊断的培养确认检测提供可靠结果。