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鉴定秀丽隐杆线虫在长期低剂量纳米聚苯乙烯暴露后的长非编码 RNA。

Identification of long non-coding RNAs in response to nanopolystyrene in Caenorhabditis elegans after long-term and low-dose exposure.

机构信息

Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China.

College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.

出版信息

Environ Pollut. 2019 Dec;255(Pt 1):113137. doi: 10.1016/j.envpol.2019.113137. Epub 2019 Sep 12.

Abstract

The potential adverse effects of nanoplastics, such as nanopolystyrene, have received the great attention recently. However, the molecular response of organisms to nanoplastics is still largely unknown. In this study, we employed Caenorhabditis elegans as an animal model to investigate the long non-coding RNAs (lncRNAs) in response to long-term exposure to low-dose nanopolystyrene (100 nm). Based on Hiseq 2000 sequencing and qRT-PCR confirmation, we identified 36 lncRNAs (21 down-regulated lncRNAs and 15 up-regulated lncRNAs) in response to nanopolystyrene (1 μg/L). Using intestinal reactive oxygen species (ROS) production and locomotion behavior as endpoints, we found that RNAi knockdown of linc-2, linc-9, or linc-61 induced a susceptibility to nanopolystyrene toxicity, and RNAi knockdown of linc-18 or linc-50 induced a resistance to nanopolystyrene toxicity. Meanwhile, nanopolystyrene (1 μg/L) increased expressions of linc-2, linc-9, linc-18, and linc-61 and decreased linc-50 expression, suggesting that these 5 lncRNAs mediated two different responses to nanopolystyrene exposure. Bioinformatical analysis implied that these 5 lncRNAs were associated with multiple biological processes and signaling pathways. Our results demonstrated the crucial roles of lncRNAs in response to long-term exposure to low-dose nanopolystyrene in organisms.

摘要

纳米塑料(如纳米聚苯乙烯)的潜在不良影响最近引起了极大关注。然而,生物体对纳米塑料的分子反应在很大程度上仍然未知。在这项研究中,我们使用秀丽隐杆线虫作为动物模型,研究了长期暴露于低剂量纳米聚苯乙烯(100nm)时的长非编码 RNA(lncRNA)。基于 Hiseq 2000 测序和 qRT-PCR 验证,我们鉴定出 36 个 lncRNA(21 个下调的 lncRNA 和 15 个上调的 lncRNA)对纳米聚苯乙烯(1μg/L)有反应。通过肠道活性氧(ROS)产生和运动行为作为终点,我们发现 linc-2、linc-9 或 linc-61 的 RNAi 敲低会导致对纳米聚苯乙烯毒性的易感性,而 linc-18 或 linc-50 的 RNAi 敲低会导致对纳米聚苯乙烯毒性的抗性。同时,纳米聚苯乙烯(1μg/L)增加了 linc-2、linc-9、linc-18 和 linc-61 的表达,降低了 linc-50 的表达,表明这 5 个 lncRNA 介导了对纳米聚苯乙烯暴露的两种不同反应。生物信息学分析表明,这 5 个 lncRNA 与多个生物学过程和信号通路有关。我们的研究结果表明,lncRNA 在生物体对低剂量纳米聚苯乙烯的长期暴露中起着至关重要的作用。

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