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用于现代疫苗开发的计算工具。

Computational tools for modern vaccine development.

机构信息

Enzyme Technology and Protein Bioinformatics Laboratory, Department of Microbiology, Maharshi Dayanand University, Rohtak, India.

Bacterial Pathogenesis Laboratory, Department of Zoology, University of Delhi, Delhi.

出版信息

Hum Vaccin Immunother. 2020 Mar 3;16(3):723-735. doi: 10.1080/21645515.2019.1670035. Epub 2019 Dec 18.

DOI:10.1080/21645515.2019.1670035
PMID:31545127
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7227725/
Abstract

Vaccines play an essential role in controlling the rates of fatality and morbidity. Vaccines not only arrest the beginning of different diseases but also assign a gateway for its elimination and reduce toxicity. This review gives an overview of the possible uses of computational tools for vaccine design. Moreover, we have described the initiatives of utilizing the diverse computational resources by exploring the immunological databases for developing epitope-based vaccines, peptide-based drugs, and other resources of immunotherapeutics. Finally, the applications of multi-graft and multivalent scaffolding, codon optimization and antibodyomics tools in identifying and designing vaccine candidates are described.

摘要

疫苗在控制病死率和发病率方面发挥着重要作用。疫苗不仅可以阻止疾病的发生,还为疾病的消除开辟了道路,并降低了毒性。本综述概述了计算工具在疫苗设计中的可能应用。此外,我们还描述了利用各种计算资源的举措,通过探索免疫数据库来开发基于表位的疫苗、基于肽的药物和其他免疫治疗资源。最后,描述了多嵌合体和多价支架、密码子优化和抗体组学工具在鉴定和设计疫苗候选物方面的应用。

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Toxins (Basel). 2019 Jun 14;11(6):339. doi: 10.3390/toxins11060339.
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Design and evaluation of a multi-epitope assembly peptide vaccine against Acinetobacter baumannii infection in mice.设计和评估一种针对鲍曼不动杆菌感染的多表位组装肽疫苗在小鼠中的应用。
Swiss Med Wkly. 2019 Jun 16;149:w20052. doi: 10.4414/smw.2019.20052. eCollection 2019 Jun 3.
3
Rational Design of Zika Virus Subunit Vaccine with Enhanced Efficacy.具有增强效力的寨卡病毒亚单位疫苗的合理设计。
J Virol. 2019 Aug 13;93(17). doi: 10.1128/JVI.02187-18. Print 2019 Sep 1.
4
Host targeted antiviral (HTA): functional inhibitor compounds of scaffold protein RACK1 inhibit herpes simplex virus proliferation.宿主靶向抗病毒药物(HTA):支架蛋白RACK1的功能性抑制剂化合物可抑制单纯疱疹病毒增殖。
Oncotarget. 2019 May 14;10(35):3209-3226. doi: 10.18632/oncotarget.26907.
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The Future of Flu: A Review of the Human Challenge Model and Systems Biology for Advancement of Influenza Vaccinology.流感的未来:人类挑战模型和系统生物学在流感疫苗学中的应用综述。
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