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斑马鱼中 S100 家族对细菌和病毒感染的转录组反应。

Transcriptomic responses of S100 family to bacterial and viral infection in zebrafish.

机构信息

Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Ministry of Education, Shanghai Ocean University, Shanghai, 201306, China; International Research Center for Marine Biosciences at Shanghai Ocean University, Ministry of Science and Technology, China; National Demonstration Center for Experimental Fisheries Science Education, Shanghai Ocean University, Shanghai, China.

State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei Province, 430072, China.

出版信息

Fish Shellfish Immunol. 2019 Nov;94:685-696. doi: 10.1016/j.fsi.2019.09.051. Epub 2019 Sep 20.

Abstract

The S100 family proteins are a group of small acidic polypeptides and have diverse functions in regulating many aspects of physiological processes. They are structurally conserved and possess two EF-hands which are central for calcium-mediated functions. In this study, 14 S100 cDNA sequences were determined in zebrafish and their genomic organizations confirmed. Re-analyzing the gene synteny of the S100 loci identified two major S100 loci in Chr16 and Chr19 which share remarkable conservation with the S100 locus in human Chr1, suggesting they may have evolved from a single locus during the teleost specific whole genome duplication event. It appears that the homologues of human S100G and S100P have been lost in zebrafish. Expression analysis reveals that S100W, ICN1 and ICN2 are markedly expressed in embryos. Further, the transcripts of S100 genes are relatively abundant in mucosal tissues such as gills and gut. Intraperitoneal injection of poly(I:C) resulted in up-regulation of most S100 genes in the gut and spleen, with highest induction of S100V2 and S100Z detected. In fish challenged with spring viremia of carp virus (SVCV), expression of most S100 family genes was increased in the spleen between day 1 and 7 post infection, with consistent induction seen for the S100A1, S100A10b, S100B, S100ICN1, S100T, S100U, S100V1 and S100Z. Interestingly, intraperitoneal injection of Edwardsiella tarda down-regulated S100 expression in the gut but resulted in induction in the spleen. The results demonstrate that the S100 family genes are differentially modulated by bacterial and viral pathogens in zebrafish.

摘要

S100 蛋白家族是一组小的酸性多肽,在调节许多生理过程方面具有多种功能。它们在结构上保守,具有两个 EF 手,这对于钙介导的功能至关重要。在这项研究中,在斑马鱼中确定了 14 个 S100 cDNA 序列,并证实了它们的基因组组织。重新分析 S100 基因座的基因同线性,确定了 Chr16 和 Chr19 上的两个主要 S100 基因座,它们与人类 Chr1 上的 S100 基因座具有显著的保守性,表明它们可能是在硬骨鱼特异性全基因组复制事件中从单个基因座进化而来的。似乎人类 S100G 和 S100P 的同源物在斑马鱼中丢失了。表达分析显示,S100W、ICN1 和 ICN2 在胚胎中表达显著。此外,S100 基因的转录物在鳃和肠道等粘膜组织中相对丰富。腹腔注射 poly(I:C)导致肠道和脾脏中大多数 S100 基因上调,检测到 S100V2 和 S100Z 的诱导最高。在鲤鱼病毒性春血症病毒(SVCV)攻毒的鱼类中,感染后第 1 天至第 7 天,脾脏中大多数 S100 家族基因的表达增加,S100A1、S100A10b、S100B、S100ICN1、S100T、S100U、S100V1 和 S100Z 一致诱导。有趣的是,腹腔注射迟钝爱德华氏菌下调了肠道中的 S100 表达,但在脾脏中诱导了 S100 表达。结果表明,S100 家族基因在斑马鱼中受到细菌和病毒病原体的差异调节。

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