Biocomplexity Institute, Virginia Tech, Blacksburg, VA 24061, USA.
Department of Biomedical Sciences and Pathobiology, Virginia Tech, Blacksburg, VA 24061, USA.
Int J Syst Evol Microbiol. 2020 Jan;70(1):180-186. doi: 10.1099/ijsem.0.003730.
The Gram-negative bacterium is the etiologic agent of Glässer's disease in pigs, and causes significant economic losses to the swine industry. This bacterium has been classified as a member of the family in the genus , but phylogenetic relatedness has not been adequately examined to support this genus classification. Phenotypically, all 38 strains of tested were positive for catalase activity, oxidase activity, V-factor requirement, and acid formation from maltose and d-galactose without gas. All strains were negative for X-factor requirement, formation of indole from tryptophan, urease, l-arabinose, and α-glucosidase activity. To determine whether belongs to one of the current genera 40 . genomes, plus those of representative , were subjected to phylogenetic analysis of concatenated, multi-protein alignments. Sequence variation at 16S rRNA and loci allowed the 15 reference serovars of to be integrated into the whole-genome tree. The phylogenetic analysis showed to be a distinct and tight clade whose sister taxon is the genus . Within two clades were identified with individual serovars distributed between the two. As a result, was confirmed as a member of the family , but was distinct from other genera in this family. Therefore, we propose the name , gen. nov., comb. nov. for bacterial strains currently classified as . The reference strain of this species is ATCC 19417 (1374), NCTC 4557, DSM 21448, CCUG 3712.
革兰氏阴性菌是猪格拉瑟氏病的病原体,给养猪业造成了重大的经济损失。该细菌被归类为家族中的一员,但尚未充分检查其系统发育关系以支持这种属分类。表型上,测试的 38 株均为阳性,具有过氧化氢酶活性、氧化酶活性、V 因子需求以及从麦芽糖和 D-半乳糖形成酸而不产气。所有菌株均为 X 因子需求阴性、色氨酸吲哚形成阴性、脲酶阴性、L-阿拉伯糖阴性和α-葡萄糖苷酶活性阴性。为了确定是否属于当前 40 个属之一,对 基因组和代表种的基因组进行了串联多蛋白比对的系统发育分析。16S rRNA 和基因座的序列变异允许将 15 个参考血清型整合到全基因组树中。系统发育分析表明是一个独特而紧密的分支,其姐妹分类群是属。在中鉴定出两个分支,各个血清型分布在两个分支之间。因此,被确认为家族的成员,但与该家族中的其他属不同。因此,我们建议将目前归类为的细菌菌株命名为,新属,新组合。该物种的参考菌株是 ATCC 19417(1374)、NCTC 4557、DSM 21448、CCUG 3712。