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sp. nov.,一种从印度 Shillong 的 Umiam 湖分离出的耐碱细菌。

sp. nov., an alkalitolerent bacterium isolated from Umiam lake, Shillong, India.

机构信息

Department of Plant Sciences, School of Life Sciences, University of Hyderabad, P.O. Central University, Hyderabad 500046, India.

Bacterial Discovery Laboratory, Centre for Environment, Institute of Science and Technology, JNT University Hyderabad, Kukatpally, Hyderabad-500085, India.

出版信息

Int J Syst Evol Microbiol. 2020 Jan;70(1):662-667. doi: 10.1099/ijsem.0.003813.

Abstract

A Gram-stain-negative, motile, alkali-tolerant, swollen-rod shaped, reddish brown coloured, phototrophic bacterium designated as strain JA980, was isolated from freshwater sampled at Umiam lake, Shillong, India. Strain JA980 grew well up to pH 9.0. Respiratory quinones were ubiquinone 10 and rhodoquinone 10. The major fatty acid was C ω7/Cω6c with minor amounts of C, C, C 3-OH and C 3-OH. Strain JA980 contained bacteriochlorophyll- and carotenoids of the spirilloxanthin series. The polar lipids of strain JA980 comprised phosphatidylethanolamine, phosphatidylcholine, diphosphatidylglycerol, an unidentified phospholipid, unidentified amino lipids (AL1,3,4,5) and an unidentified lipid (L1). Strain JA980 had the highest (99.57 %) 16S rRNA gene sequence similarity to the type strains of ATCC17100 and JA643. The genome of strain JA980 was 3.88 Mbp with a DNA G+C content of 62.4 mol%. Based on the results of phylogenetic analyses, low DNA-DNA hybridization values (33 %), low (87 %) average nucleotide identity results, chemotaxonomic characteristics and differential physiological properties, strain JA980 could not be classified into either of the two recognized species of the genus , suggesting that it represents a novel species, for which the name sp. nov. is proposed. The type strain is JA980 (=KCTC 15697= MCC 3714= NBRC 113803).

摘要

一株革兰氏阴性、运动性、耐碱、肿胀杆状、红棕色、光能营养型细菌,被命名为 JA980 菌株,从印度梅加拉亚邦乌米亚姆湖采集的淡水中分离得到。JA980 菌株在 pH 值为 9.0 时生长良好。呼吸醌为泛醌 10 和菌绿烯醌 10。主要脂肪酸为 C ω7/Cω6c,少量的 C 16:0、C 18:1ω7c 和 C 3-OH。JA980 菌株含有细菌叶绿素和螺旋藻叶黄素系列的类胡萝卜素。JA980 菌株的极性脂包括磷脂酰乙醇胺、磷脂酰胆碱、双磷脂酰甘油、一种未鉴定的磷脂、未鉴定的氨基酸脂(AL1、3、4、5)和一种未鉴定的脂(L1)。JA980 菌株与 ATCC17100 和 JA643 两种模式菌株的 16S rRNA 基因序列相似性最高(99.57%)。JA980 菌株的基因组大小为 3.88 Mbp,G+C 含量为 62.4 mol%。基于系统发育分析的结果、低 DNA-DNA 杂交值(33%)、低平均核苷酸同一性(87%)结果、化学生态学特征和差异生理特性,JA980 菌株不能归入任何已被认可的属内的两个种,表明它代表了一个新的种,建议将其命名为 sp. nov.。其模式菌株为 JA980(=KCTC 15697= MCC 3714= NBRC 113803)。

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