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医院病原菌医院不动杆菌菌株M2的全基因组序列

Complete Genome Sequence of the Nosocomial Pathogen Acinetobacter nosocomialis Strain M2.

作者信息

Pehde Bailey, Lizer Nicholas, Carruthers Michael

机构信息

Department of Microbiology and Immunology, College of Osteopathic Medicine, Des Moines University, Des Moines, Iowa, USA.

Department of Microbiology and Immunology, College of Osteopathic Medicine, Des Moines University, Des Moines, Iowa, USA

出版信息

Microbiol Resour Announc. 2019 Oct 31;8(44):e00538-19. doi: 10.1128/MRA.00538-19.

DOI:10.1128/MRA.00538-19
PMID:31672736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6953502/
Abstract

is an opportunistic human pathogen that is part of the / (ACB) complex. Here, we report the complete genome sequence of strain M2.

摘要

是一种机会性人类病原体，是/（ACB）复合体的一部分。在此，我们报告菌株M2的完整基因组序列。

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本文引用的文献

1
: Defining the Role of Efflux Pumps in Resistance to Antimicrobial Therapy, Surface Motility, and Biofilm Formation.确定外排泵在抗微生物治疗耐药性、表面运动性和生物膜形成中的作用。
Front Microbiol. 2018 Aug 21;9:1902. doi: 10.3389/fmicb.2018.01902. eCollection 2018.
2
Minimap2: pairwise alignment for nucleotide sequences.Minimap2：核苷酸序列的两两比对。
Bioinformatics. 2018 Sep 15;34(18):3094-3100. doi: 10.1093/bioinformatics/bty191.
3
RefSeq: an update on prokaryotic genome annotation and curation.RefSeq：原核生物基因组注释和管理的最新进展。
Nucleic Acids Res. 2018 Jan 4;46(D1):D851-D860. doi: 10.1093/nar/gkx1068.
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Defining the interaction of the protease CpaA with its type II secretion chaperone CpaB and its contribution to virulence in species.确定蛋白酶CpaA与其II型分泌伴侣蛋白CpaB之间的相互作用及其对该物种毒力的贡献。
J Biol Chem. 2017 Dec 1;292(48):19628-19638. doi: 10.1074/jbc.M117.808394. Epub 2017 Oct 5.
5
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
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Pathogenic species have a functional type I secretion system and contact-dependent inhibition systems.致病物种具有功能性的I型分泌系统和接触依赖性抑制系统。
J Biol Chem. 2017 Jun 2;292(22):9075-9087. doi: 10.1074/jbc.M117.781575. Epub 2017 Apr 3.
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Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu：通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
8
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
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