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支持对感染单纯疱疹病毒1型的人角膜上皮细胞进行蛋白质组学表征的数据集。

Dataset supporting the proteomic characterization of human corneal epithelial cells with HSV-1 infection.

作者信息

Xu Zhi-Yi, Li Jia-Hui, Li Mei-Jun, Zheng Wen-Lin, Pan Hong-Wei

机构信息

Department of Ophthalmology, The First Affiliated Hospital, Jinan University, Guangzhou, China.

Institute of Ophthalmology, School of Medicine, Jinan University, Guangzhou, China.

出版信息

Data Brief. 2019 Sep 28;27:104579. doi: 10.1016/j.dib.2019.104579. eCollection 2019 Dec.

Abstract

HSV-1 infection in cornea can cause corneal ulcer, scar formation and neovascularization, and finally lead to severe visual impairment. The corneal epithelium is the first barrier against HSV-1 infection, but the host-virus interaction in human corneal epithelial cells (HCECs) in the process is still not well understood. We applied iTRAQ based proteomic approach to investigate the dynamic change of the protein expression profile in HCECs with a view to gain insight into the host response to HSV-1 infection. Bioinformatic analysis of these dysregulated proteins help us to find the potential gene function and signaling pathway with which these dysregulated proteins are associated. In this work, we present the supporting information for the proteomic characterization for better share and reuse. The main methodological approaches and major findings of the proteomic experiments are described in [1].

摘要

单纯疱疹病毒1型(HSV-1)感染角膜可导致角膜溃疡、瘢痕形成和新生血管形成,最终导致严重的视力损害。角膜上皮是抵御HSV-1感染的第一道屏障,但在此过程中人类角膜上皮细胞(HCECs)中的宿主-病毒相互作用仍未完全明确。我们应用基于iTRAQ的蛋白质组学方法来研究HCECs中蛋白质表达谱的动态变化,以期深入了解宿主对HSV-1感染的反应。对这些失调蛋白质的生物信息学分析有助于我们发现与这些失调蛋白质相关的潜在基因功能和信号通路。在这项工作中,我们提供蛋白质组学特征的支持信息,以便更好地共享和重用。蛋白质组学实验的主要方法和主要发现已在[1]中描述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/6817629/20834c369e89/gr1.jpg

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