Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Nucleic Acids Res. 2020 Jan 8;48(D1):D756-D761. doi: 10.1093/nar/gkz1012.
The University of California Santa Cruz Genome Browser website (https://genome.ucsc.edu) enters its 20th year of providing high-quality genomics data visualization and genome annotations to the research community. In the past year, we have added a new option to our web BLAT tool that allows search against all genomes, a single-cell expression viewer (https://cells.ucsc.edu), a 'lollipop' plot display mode for high-density variation data, a RESTful API for data extraction and a custom-track backup feature. New datasets include Tabula Muris single-cell expression data, GeneHancer regulatory annotations, The Cancer Genome Atlas Pan-Cancer variants, Genome Reference Consortium Patch sequences, new ENCODE transcription factor binding site peaks and clusters, the Database of Genomic Variants Gold Standard Variants, Genomenon Mastermind variants and three new multi-species alignment tracks.
加州大学圣克鲁兹分校基因组浏览器网站（https://genome.ucsc.edu）迎来了向研究界提供高质量基因组数据可视化和基因组注释的第 20 个年头。在过去的一年里，我们在网络 BLAT 工具中添加了一个新选项，可以针对所有基因组进行搜索，单细胞表达查看器（https://cells.ucsc.edu），高密度变异数据的棒棒糖图显示模式，用于数据提取的 RESTful API 和自定义轨道备份功能。新数据集包括 Tabula Muris 单细胞表达数据、GeneHancer 调控注释、癌症基因组图谱泛癌变体、基因组参考联盟补丁序列、新的 ENCODE 转录因子结合位点峰和簇、基因组变异数据库金标准变异、Genomenon Mastermind 变异以及三个新的多物种对齐轨道。
Nucleic Acids Res. 2020-1-8
Nucleic Acids Res. 2013-11-21
Nucleic Acids Res. 2009-11-11
Nucleic Acids Res. 2012-11-15
Nucleic Acids Res. 2003-1-1
Bioinformatics. 2013-11-13
Nucleic Acids Res. 2009-11-17
Nucleic Acids Res. 2023-1-6
Brief Bioinform. 2012-8-20
Nucleic Acids Res. 2019-1-8
Appl Biochem Biotechnol. 2025-9-9
Integr Org Biol. 2025-6-27
Bioinformatics. 2019-3-15
Nucleic Acids Res. 2019-2-28
Nucleic Acids Res. 2019-1-8
Nucleic Acids Res. 2018-9-19
Genome Biol. 2018-2-6
Database (Oxford). 2017-1-1
N Engl J Med. 2016-9-22
Zotero 插件