Pan Daqiang, Wiedemann Nils, Kammerer Bernd
Centre for Integrative Signalling Analysis (CISA), University of Freiburg, 79104 Freiburg, Germany.
Institute of Pharmaceutical Science, University of Freiburg, 79104 Freiburg, Germany.
Metabolites. 2019 Nov 5;9(11):266. doi: 10.3390/metabo9110266.
Yeast cells respond to heat stress by remodeling their gene expression, resulting in the changes of the corresponding proteins and metabolites. Compared to the intensively investigated transcriptome and proteome, the metabolic response to heat stress is not sufficiently characterized. Mitochondria have been recognized to play an essential role in heat stress tolerance. Given the compartmentalization of the cell, it is not clear if the heat stress-induced metabolic response occurs in mitochondria or in the cytosol. Therefore, a compartment-specific metabolite analysis was performed to analyze the heat stress-induced metabolic response in mitochondria and the cytoplasm. In this work, the isolated mitochondria and the cytoplasm of yeast cells grown at permissive temperature and cells adapting to heat stress were subjected to mass spectrometry-based metabolomics. Over a hundred metabolites could be identified, covering amino acid metabolism, energy metabolism, arginine metabolism, purine and pyrimidine metabolism, and others. Highly accumulated citrulline and reduced arginine suggested remodeled arginine metabolism. A stable isotope-labeled experiment was performed to analyze the heat stress-induced metabolic remodeling of the arginine metabolism, identifying activated ornithine biosynthesis to support arginine and spermidine synthesis. The short-term increased spermidine and trehalose suggest their important roles as heat stress markers. These data provide metabolic clues of heat stress-induced metabolic remodeling, which helps in understanding the heat stress response.
酵母细胞通过重塑其基因表达来应对热应激,从而导致相应蛋白质和代谢物的变化。与深入研究的转录组和蛋白质组相比,热应激的代谢反应尚未得到充分表征。线粒体在热应激耐受性中起着至关重要的作用。鉴于细胞的区室化,尚不清楚热应激诱导的代谢反应是发生在线粒体还是细胞质中。因此,进行了区室特异性代谢物分析,以分析线粒体和细胞质中热应激诱导的代谢反应。在这项工作中,对在适宜温度下生长的酵母细胞以及适应热应激的细胞的分离线粒体和细胞质进行了基于质谱的代谢组学分析。可以鉴定出一百多种代谢物,涵盖氨基酸代谢、能量代谢、精氨酸代谢、嘌呤和嘧啶代谢等。瓜氨酸高度积累和精氨酸减少表明精氨酸代谢发生了重塑。进行了一项稳定同位素标记实验,以分析热应激诱导的精氨酸代谢的代谢重塑,确定激活鸟氨酸生物合成以支持精氨酸和亚精胺合成。短期增加的亚精胺和海藻糖表明它们作为热应激标志物的重要作用。这些数据提供了热应激诱导的代谢重塑的代谢线索,有助于理解热应激反应。