Le Hingrat Quentin, Perrier Marine, Charpentier Charlotte, Jacquot Alaric, Houhou-Fidouh Nadhira, Descamps Diane, Visseaux Benoit
Université de Paris, INSERM UMR 1137 IAME, F-75018, Paris, France; Laboratoire de Virologie, AP-HP, Hôpital Bichat-Claude Bernard, F-75018, Paris, France.
Université de Paris, INSERM UMR 1137 IAME, F-75018, Paris, France; Laboratoire de Virologie, AP-HP, Hôpital Bichat-Claude Bernard, F-75018, Paris, France.
Travel Med Infect Dis. 2019 Nov-Dec;32:101512. doi: 10.1016/j.tmaid.2019.101512. Epub 2019 Nov 5.
Zika virus (ZIKV) was initially responsible for a limited number of punctual epidemics throughout Africa and Asia. Recently, large epidemics occurred in French Polynesia, Brazil and Pan-America. These outbreaks were associated with severe outcomes such as Guillain-Barré Syndrome and microcephaly of in-utero infected newborns. Previous studies demonstrated that ZIKV was introduced in Brazil from French Polynesia but failed to identify a founding event.
All publicly available ZIKV full-genome sequences (n = 182) were phylogenetically analyzed, using Bayesian method, to estimate the introduction date of ZIKV into Brazil.
Introduction date into Brazil was estimated between 8th of July 2013 and 4th of November 2013, encompassing the Beach Soccer World Cup held in French Polynesia, in September 2013, which gathered Brazilian athletes and supporters. We also observed that ZIKV sequences from travelers infected in South-East Asia or in Pacific islands were closely related to viruses identified prior to the French Polynesian epidemic, underlining an endemic circulation of ZIKV in those countries since 2007, at least.
This work provides a narrower estimation of ZIKV introduction into Brazil and illustrates the need for a better exploration of ZIKV circulation and endemicity in South-East Asia, while epidemiological and prevention efforts have been mainly focused on the Pan-American epidemic.
寨卡病毒(ZIKV)最初在非洲和亚洲引发了有限的局部疫情。最近,法属波利尼西亚、巴西和泛美地区出现了大规模疫情。这些疫情与严重后果相关,如吉兰-巴雷综合征和宫内感染新生儿的小头畸形。先前的研究表明,寨卡病毒是从法属波利尼西亚传入巴西的,但未能确定其引入事件。
使用贝叶斯方法对所有公开可用的寨卡病毒全基因组序列(n = 182)进行系统发育分析,以估计寨卡病毒传入巴西的日期。
估计寨卡病毒传入巴西的日期在2013年7月8日至2013年11月4日之间,这期间包括2013年9月在法属波利尼西亚举行的沙滩足球世界杯,该赛事聚集了巴西运动员和支持者。我们还观察到,在东南亚或太平洋岛屿感染的旅行者的寨卡病毒序列与法属波利尼西亚疫情之前鉴定出的病毒密切相关,这表明至少自2007年以来,寨卡病毒就在这些国家呈地方性传播。
这项工作对寨卡病毒传入巴西的时间给出了更精确的估计,并表明在流行病学和预防工作主要集中在泛美疫情的同时,有必要更好地探索寨卡病毒在东南亚的传播情况和地方性流行情况。