• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

两个基因座，即 和 ，对 中的年度结果实性状有贡献。

Two Loci, and , Contribute to the Annual-Fruiting Trait in .

作者信息

Jibran Rubina, Spencer Jessica, Fernandez Gina, Monfort Amparo, Mnejja Mourad, Dzierzon Helge, Tahir Jibran, Davies Kevin, Chagné David, Foster Toshi M

机构信息

The New Zealand Institute for Plant & Food Research Limited, Palmerston North Research Centre, Palmerston North, New Zealand.

Department of Horticultural Science, North Carolina State University, Raleigh, NC, United States.

出版信息

Front Plant Sci. 2019 Oct 25;10:1341. doi: 10.3389/fpls.2019.01341. eCollection 2019.

DOI:10.3389/fpls.2019.01341
PMID:31708950
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6824294/
Abstract

Most species have a biennial cycle of flowering and fruiting with an intervening period of winter dormancy, in common with many perennial fruit crops. Annual-fruiting (AF) varieties of raspberry ( and L.) and blackberry ( subgenus ) are able to flower and fruit in one growing season, without the intervening dormant period normally required in biennial-fruiting (BF) varieties. We used a red raspberry () population segregating for AF obtained from a cross between NC493 and 'Chilliwack' to identify genetic factors controlling AF. Genotyping by sequencing (GBS) was used to generate saturated linkage maps in both parents. Trait mapping in this population indicated that AF is controlled by two newly identified loci ( and ) located on linkage groups (LGs) 3 and 4. The location of these loci was analyzed using single-nucleotide polymorphism (SNP) markers on independent red raspberry and blackberry populations segregating for the AF trait. This confirmed that AF in is regulated by loci on LG 3 and 4, in addition to a previously reported locus on LG 7. Comparative RNAseq analysis at the time of floral bud differentiation in an AF and a BF variety revealed candidate genes potentially regulating the trait.

摘要

与许多多年生果树作物一样，大多数物种具有两年一次的开花结果周期，并伴有冬季休眠期。树莓（悬钩子属）和黑莓（黑莓亚属）的一年生结果（AF）品种能够在一个生长季节内开花结果，无需两年生结果（BF）品种通常所需的中间休眠期。我们利用从NC493和“奇利瓦克”杂交后代中分离得到的一个AF红树莓群体来鉴定控制AF的遗传因素。通过测序进行基因分型（GBS）用于构建两个亲本的饱和连锁图谱。该群体的性状定位表明，AF受位于连锁群（LG）3和4上的两个新鉴定的基因座（AF1和AF2）控制。利用独立的红树莓和黑莓群体中分离的AF性状的单核苷酸多态性（SNP）标记对这些基因座的位置进行了分析。这证实了树莓中的AF除了受LG 7上先前报道的一个基因座调控外，还受LG 3和4上的基因座调控。对一个AF品种和一个BF品种花芽分化时的比较RNA测序分析揭示了可能调控该性状的候选基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/a30050069d60/fpls-10-01341-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/ffdee153e424/fpls-10-01341-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/5b433b49ba22/fpls-10-01341-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/e99be0c3e917/fpls-10-01341-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/74c113258ead/fpls-10-01341-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/230a83ac2bec/fpls-10-01341-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/adf18c095c15/fpls-10-01341-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/a30050069d60/fpls-10-01341-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/ffdee153e424/fpls-10-01341-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/5b433b49ba22/fpls-10-01341-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/e99be0c3e917/fpls-10-01341-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/74c113258ead/fpls-10-01341-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/230a83ac2bec/fpls-10-01341-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/adf18c095c15/fpls-10-01341-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a486/6824294/a30050069d60/fpls-10-01341-g007.jpg

相似文献

1
Two Loci, and , Contribute to the Annual-Fruiting Trait in .两个基因座，即 和 ，对 中的年度结果实性状有贡献。
Front Plant Sci. 2019 Oct 25;10:1341. doi: 10.3389/fpls.2019.01341. eCollection 2019.
2
A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. "Hillquist").黑莓（Rubus argutus，cv. "Hillquist"）染色体级别的基因组组装和注释。
G3 (Bethesda). 2023 Feb 9;13(2). doi: 10.1093/g3journal/jkac289.
3
Genetic map of the primocane-fruiting and thornless traits of tetraploid blackberry.四倍体黑莓的一次结实和无刺性状的遗传图谱。
Theor Appl Genet. 2013 Oct;126(10):2521-32. doi: 10.1007/s00122-013-2152-3. Epub 2013 Jul 16.
4
Enhancement of Glen Moy x Latham raspberry linkage map using GbS to further understand control of developmental processes leading to fruit ripening.利用基因型测序技术（GbS）增强格伦·莫伊（Glen Moy）与莱瑟姆（Latham）树莓的连锁图谱，以进一步了解导致果实成熟的发育过程的调控机制。
BMC Genet. 2018 Aug 15;19(1):59. doi: 10.1186/s12863-018-0666-z.
5
Adaptation of primocane fruiting raspberry plants to environmental factors under the influence of Bacillus strains in Western Siberia.西伯利亚西部芽孢杆菌菌株影响下的一年生结果型树莓植株对环境因素的适应性
Environ Sci Pollut Res Int. 2017 Mar;24(8):7016-7022. doi: 10.1007/s11356-017-8427-5. Epub 2017 Jan 14.
6
Quantitative trait loci mapping of polyphenol metabolites from a 'Latham' x 'Glen Moy' red raspberry (Rubus idaeus L) cross.“Latham' x 'Glen Moy' 红树莓（Rubus idaeus L）杂交后代中多酚代谢物的数量性状位点定位。”
Metabolomics. 2023 Aug 8;19(8):71. doi: 10.1007/s11306-023-02033-7.
7
Construction of black (Rubus occidentalis) and red (R. idaeus) raspberry linkage maps and their comparison to the genomes of strawberry, apple, and peach.黑莓（Rubus occidentalis）和红树莓（R. idaeus）的连锁图谱构建及其与草莓、苹果和桃基因组的比较。
Theor Appl Genet. 2012 Jul;125(2):311-27. doi: 10.1007/s00122-012-1835-5. Epub 2012 Mar 8.
8
A Rosaceae Family-Level Approach To Identify Loci Influencing Soluble Solids Content in Blackberry for DNA-Informed Breeding.一种基于蔷薇科科级水平的方法来鉴定影响黑莓可溶性固形物含量的基因座，用于基于DNA的育种。
G3 (Bethesda). 2020 Oct 5;10(10):3729-3740. doi: 10.1534/g3.120.401449.
9
Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation.利用测序基因型和与基因组无关的推断构建树莓饱和连锁图谱。
BMC Genomics. 2013 Jan 16;14:2. doi: 10.1186/1471-2164-14-2.
10
Chromosome-scale genome sequence assemblies of the 'Autumn Bliss' and 'Malling Jewel' cultivars of the highly heterozygous red raspberry (Rubus idaeus L.) derived from long-read Oxford Nanopore sequence data.利用长读长 Oxford Nanopore 测序数据得到的高度杂合红树莓（Rubus idaeus L.）‘Autumn Bliss’和‘Malling Jewel’品种的染色体级基因组序列图谱。
PLoS One. 2023 May 16;18(5):e0285756. doi: 10.1371/journal.pone.0285756. eCollection 2023.

引用本文的文献

1
Altered expression of a raspberry homologue of VRN1 is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes.覆盆子同源物 VRN1 的表达改变与休眠诱导中断和休眠相关基因亚组的失调有关。
J Exp Bot. 2024 Oct 16;75(19):6167-6181. doi: 10.1093/jxb/erae371.
2
A multiplexed plant-animal SNP array for selective breeding and species conservation applications.用于选择性育种和物种保护应用的多重植物-动物 SNP 芯片。
G3 (Bethesda). 2023 Sep 30;13(10). doi: 10.1093/g3journal/jkad170.
3
A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. "Hillquist").

本文引用的文献

1
An explanatory model of temperature influence on flowering through whole-plant accumulation of in .一个关于温度通过植物体内[具体物质]的全株积累对开花产生影响的解释模型。 （注：原文中“in.”后面似乎缺失关键信息）
In Silico Plants. 2019;1(1). doi: 10.1093/insilicoplants/diz006. Epub 2019 May 15.
2
The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.拟南芥 H3K27me3 去甲基酶 JUMONJI 13 是一个受温度和光周期影响的开花抑制因子。
Nat Commun. 2019 Mar 21;10(1):1303. doi: 10.1038/s41467-019-09310-x.
3
Non-linear regression models for time to flowering in wild chickpea combine genetic and climatic factors.
黑莓（Rubus argutus，cv. "Hillquist"）染色体级别的基因组组装和注释。
G3 (Bethesda). 2023 Feb 9;13(2). doi: 10.1093/g3journal/jkac289.
4
A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.).红树莓（Rubus idaeus L.）的染色体水平基因组序列组装
PLoS One. 2022 Mar 16;17(3):e0265096. doi: 10.1371/journal.pone.0265096. eCollection 2022.
5
Make it bloom! CONSTANS contributes to day neutrality in rose.促成绽放！CONSTANS 促进玫瑰的长日照不敏感。
J Exp Bot. 2020 Jul 6;71(14):3923-3926. doi: 10.1093/jxb/eraa270.
野生鹰嘴豆开花时间的非线性回归模型综合了遗传和气候因素。
BMC Plant Biol. 2019 Mar 19;19(Suppl 2):94. doi: 10.1186/s12870-019-1685-2.
4
CONSTANS delays Arabidopsis flowering under short days.CONSTANS 延迟拟南芥在短日照下开花。
Plant J. 2019 Mar;97(5):923-932. doi: 10.1111/tpj.14171. Epub 2019 Jan 7.
5
Molecular basis of flowering under natural long-day conditions in Arabidopsis.拟南芥在自然长日照条件下开花的分子基础。
Nat Plants. 2018 Oct;4(10):824-835. doi: 10.1038/s41477-018-0253-3. Epub 2018 Sep 24.
6
Enhancement of Glen Moy x Latham raspberry linkage map using GbS to further understand control of developmental processes leading to fruit ripening.利用基因型测序技术（GbS）增强格伦·莫伊（Glen Moy）与莱瑟姆（Latham）树莓的连锁图谱，以进一步了解导致果实成熟的发育过程的调控机制。
BMC Genet. 2018 Aug 15;19(1):59. doi: 10.1186/s12863-018-0666-z.
7
A near complete, chromosome-scale assembly of the black raspberry (Rubus occidentalis) genome.黑覆盆子（Rubus occidentalis）基因组的近完整、染色体级别的组装。
Gigascience. 2018 Aug 1;7(8):giy094. doi: 10.1093/gigascience/giy094.
8
Genome-wide signatures of flowering adaptation to climate temperature: Regional analyses in a highly diverse native range of Arabidopsis thaliana.基因组范围的开花适应气候温度特征：拟南芥高度多样化的原生范围内的区域分析。
Plant Cell Environ. 2018 Aug;41(8):1806-1820. doi: 10.1111/pce.13189. Epub 2018 Apr 20.
9
Chromosome-scale scaffolding of the black raspberry ( L.) genome based on chromatin interaction data.基于染色质相互作用数据的黑树莓（Rubus occidentalis L.）基因组染色体水平支架构建
Hortic Res. 2018 Feb 7;5:8. doi: 10.1038/s41438-017-0013-y. eCollection 2018.
10
Additive QTLs on three chromosomes control flowering time in woodland strawberry ( L.).三条染色体上的加性数量性状基因座控制森林草莓（Fragaria vesca L.）的开花时间。
Hortic Res. 2017 May 24;4:17020. doi: 10.1038/hortres.2017.20. eCollection 2017.