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美国和印度种植作物的非靶向代谢组学揭示了植物代谢组与自然气候和地理环境的关联。

Untargeted Metabolomics of Grown in United States and India Characterizes the Association of Plant Metabolomes With Natural Climate and Geography.

作者信息

Ma Dong-Ming, Gandra Saiprasad V S, Manoharlal Raman, La Hovary Christophe, Xie De-Yu

机构信息

Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, United States.

ITC Life Sciences and Technology Centre (LSTC), ITC Limited, Karnataka, Bengaluru, India.

出版信息

Front Plant Sci. 2019 Oct 30;10:1370. doi: 10.3389/fpls.2019.01370. eCollection 2019.

Abstract

Climate change and geography affect all the living organisms. To date, the effects of climate and geographical factors on plant metabolome largely remain open for worldwide and local investigations. In this study, we designed field experiments with tobacco () in India USA and used untargeted metabolomics to understand the association of two weather factors and two different continental locations with respect to tobacco metabolism. Field research stations in Oxford, North Carolina, USA, and Rajahmundry, Andhra Pradesh India were selected to grow a commercial tobacco genotype (K326) for 2 years. Plant growth, field management, and leaf curing followed protocols standardized for tobacco cultivation. Gas chromatography-mass spectrometry based unbiased profiling annotated 171 non-polar and 225 polar metabolites from cured tobacco leaves. Principal component analysis (PCA) and hierarchical cluster analysis (HCA) showed that two growing years and two field locations played primary and secondary roles affecting metabolite profiles, respectively. PCA and Pearson analysis, which used nicotine, 11 other groups of metabolites, two locations, temperatures, and precipitation, revealed that in North Carolina, temperature changes were positively associated with the profiles of sesquiterpenes, diterpenes, and triterpenes, but negatively associated with the profiles of nicotine, organic acids of tricarboxylic acid, and sugars; in addition, precipitation was positively associated with the profiles of triterpenes. In India, temperature was positively associated with the profiles of benzenes and polycyclic aromatic hydrocarbons, but negatively associated with the profiles of amino acids and sugar. Further comparative analysis revealed that nicotine levels were affected by weather conditions, nevertheless, its trend in leaves was independent of two geographical locations and weather changes. All these findings suggested that climate and geographical variation significantly differentiated the tobacco metabolism.

摘要

气候变化和地理位置影响着所有生物。迄今为止,气候和地理因素对植物代谢组的影响在全球和本地研究中大多仍未明确。在本研究中,我们在印度和美国对烟草开展了田间试验,并使用非靶向代谢组学来了解两种天气因素和两个不同大陆位置与烟草代谢之间的关联。美国北卡罗来纳州牛津和印度安得拉邦拉贾蒙德里的田间研究站被选来种植一种商业烟草基因型(K326),为期两年。植物生长、田间管理和烟叶烘烤均遵循烟草种植的标准化方案。基于气相色谱 - 质谱的无偏分析从烘烤后的烟叶中注释出171种非极性和225种极性代谢物。主成分分析(PCA)和层次聚类分析(HCA)表明,两个生长年份和两个田间位置分别对代谢物谱起主要和次要影响作用。PCA和Pearson分析使用尼古丁、其他11组代谢物、两个位置、温度和降水量,结果显示,在北卡罗来纳州,温度变化与倍半萜、二萜和三萜的谱呈正相关,但与尼古丁、三羧酸有机酸和糖类的谱呈负相关;此外,降水量与三萜的谱呈正相关。在印度,温度与苯和多环芳烃的谱呈正相关,但与氨基酸和糖类的谱呈负相关。进一步的比较分析表明,尼古丁水平受天气条件影响,然而,其在叶片中的变化趋势与两个地理位置和天气变化无关。所有这些发现表明,气候和地理差异显著区分了烟草代谢。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/734e/6831618/2658ffab8c02/fpls-10-01370-g001.jpg

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