Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, 210095 Nanjing, China.
Shanghai Institute of Applied Physics, Chinese Academy of Sciences, 201204 Shanghai, China.
Int J Biol Macromol. 2020 Aug 1;156:1556-1564. doi: 10.1016/j.ijbiomac.2019.11.205. Epub 2019 Nov 28.
Myroilysin is a novel bacterial member of M12A metalloproteases family with an uncommon "cysteine switch" activation mechanism and a unique "cap" structure. However, activation of pro-myroilysin is elusive. Here, mature myroilysin was obtained for structure determination by treating pro-myroilysin with trypsin. The structure of mature myroilysin showed that the active-site zinc ion of the mature protein is coordinated by three histidine residues, a water molecule, and a tyrosine residue (Tyr208) in the conserved Met-turn motif (SIMHY). The "cap" structure moves away from the active-site to leave the active cleft open; the newly formed N-terminus is deeply buried in myroilysin, and Glu151 forms a salt bridge directly with the first amino acid residue (Gly38), whereas they are far from each other in the pro-myroilysin. The mutation of Tyr208 indicates that Tyr208 plays an important role in activity of myroilysin. The proteolytic activity and thermostability of mutant E151A decreased dramatically, implying that Glu151 is not only important for catalysis, but also crucial for structural stability in myroilysin. Structural comparison also reveals differences existed between myroilysin and astacin. Our biochemical and structural data provide new insights into the activation of myroilysin and functional involvement of crucial residues Tyr208 and Glu151.
肌溶素是一种新型的 M12A 金属蛋白酶家族的细菌成员,具有不常见的“半胱氨酸开关”激活机制和独特的“帽”结构。然而,原肌溶素的激活机制尚不清楚。在这里,通过用胰蛋白酶处理原肌溶素,获得了成熟的肌溶素来进行结构测定。成熟肌溶素的结构表明,成熟蛋白的活性部位锌离子由三个组氨酸残基、一个水分子和保守的 Met-turn 基序(SIMHY)中的酪氨酸残基(Tyr208)配位。“帽”结构从活性部位移开,使活性裂缝敞开;新形成的 N 端深深地埋在肌溶素中,Glu151 与第一个氨基酸残基(Gly38)直接形成盐桥,而在原肌溶素中它们彼此远离。Tyr208 的突变表明 Tyr208 在肌溶素的活性中起着重要作用。突变体 E151A 的蛋白水解活性和热稳定性显著降低,表明 Glu151 不仅对催化很重要,而且对肌溶素的结构稳定性也至关重要。结构比较还揭示了肌溶素和 astacin 之间存在差异。我们的生化和结构数据为肌溶素的激活以及关键残基 Tyr208 和 Glu151 的功能参与提供了新的见解。