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通过研究将细菌致病性基因转移到其基因组中,调查巨威利亚菌的潜在致病性。

Investigation of potential pathogenicity of Willaertia magna by investigating the transfer of bacteria pathogenicity genes into its genome.

机构信息

Aix-Marseille Université UM63, Institut de Recherche pour le Développement IRD 198, Assistance Publique - Hôpitaux de Marseille (AP-HM), Microbes, Evolution, Phylogeny and Infection (MEΦI), Institut Hospitalo-Universitaire (IHU) - Méditerranée Infection, Marseille, France.

Amoéba, Chassieu, France.

出版信息

Sci Rep. 2019 Dec 4;9(1):18318. doi: 10.1038/s41598-019-54580-6.

Abstract

Willaertia magna c2c maky is a thermophilic amoeba closely related to the genus Naegleria. This free-living amoeba has the ability to eliminate Legionella pneumophila, which is an amoeba-resisting bacterium living in an aquatic environment. To prevent the proliferation of L. pneumophila in cooling towers, the use of W. magna as natural biocide has been proposed. To provide a better understanding of the W. magna genome, whole-genome sequencing was performed through the study of virulence factors and lateral gene transfers. This amoeba harbors a genome of 36.5 megabases with 18,519 predicted genes. BLASTp analyses reported protein homology between 136 W. magna sequences and amoeba-resistant microorganisms. Horizontal gene transfers were observed based on the basis of the phylogenetic reconstruction hypothesis. We detected 15 homologs of N. fowleri genes related to virulence, although these latter were also found in the genome of N. gruberi, which is a non-pathogenic amoeba. Furthermore, the cytotoxicity test performed on human cells supports the hypothesis that the strain c2c maky is a non-pathogenic amoeba. This work explores the genomic repertory for the first draft genome of genus Willaertia and provides genomic data for further comparative studies on virulence of related pathogenic amoeba, N. fowleri.

摘要

巨威垒拉氏菌 c2c maky 是一种嗜热变形虫,与纳氏虫属关系密切。这种自由生活的变形虫具有消除水生环境中存在的抗变形虫细菌嗜肺军团菌的能力。为了防止冷却塔中嗜肺军团菌的增殖,已经提出使用巨威垒拉氏菌作为天然杀菌剂。为了更好地了解巨威垒拉氏菌的基因组,通过研究毒力因子和横向基因转移进行了全基因组测序。这种变形虫的基因组大小为 36.5 兆碱基,预测有 18519 个基因。BLASTp 分析报告了 136 个巨威垒拉氏菌序列与抗变形虫微生物之间的蛋白质同源性。基于系统发育重建假说观察到了水平基因转移。我们检测到了 15 个与毒力相关的 N. fowleri 基因的同源物,尽管这些同源物也存在于非致病性变形虫 N. gruberi 的基因组中。此外,对人类细胞进行的细胞毒性试验支持了菌株 c2c maky 是非致病性变形虫的假设。这项工作探索了威垒拉氏菌属的第一个基因组草案的基因组库,并为进一步研究相关致病性变形虫嗜肺军团菌的毒力提供了基因组数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/712b/6892926/a4deb8c94364/41598_2019_54580_Fig1_HTML.jpg

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