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番茄斑萎病毒M片段G/G的变化显示了一种强毒株和两种弱毒株的正选择和重组。

Changes in the G/Gof the M segment show positive selection and recombination of one aggressive isolate and two mild isolates of tomato spotted wilt virus.

作者信息

González-Pacheco B E, Delaye L, Ochoa D, Rojas R, Silva-Rosales L

机构信息

Depto de Ing. Genética, Cinvestav Unidad Irapuato, Km. 9.6 Lib. Nte. Carr. Irapuato-León, 36821, Irapuato, Gto., Mexico.

Instituto de Fitosanidad, Colegio de Postgraduados, Carretera México-Texcoco, Km 36.5. Montecillos, Mpio. Texcoco, 56230, Edo. Mex., D.F., Mexico.

出版信息

Virus Genes. 2020 Apr;56(2):217-227. doi: 10.1007/s11262-019-01723-6. Epub 2020 Jan 2.

Abstract

We isolated and compared three tomato spotted wilt virus (TSWV) isolates from lettuce (TSWV-Let), pepper (TSWV-Pep), and tomato (TSWV-Tom) from central Mexico to determine their ability to infect a set of eighteen differential plant species from seven families. TWSV-Let was an aggressive isolate with the ability to infect up to 52% of the differential plants, including maize, under greenhouse conditions. The nucleotide (nt) sequences of the three isolates are more than 90% similar in the M and S RNA segments. In the M segment of the TSWV-Let isolate, we detected nt changes in their intergenic region (IGR) and, in the Gc gene, a region containing a recombination site, as well as a synapomorphy associated with one of three sites under positive selection with a change in one aa residue (a cysteine-to-valine mutation). We speculate on the association of these features in the Gc gene with host selection, adaptation, aggressiveness, and ability to infect maize plants.

摘要

我们从墨西哥中部的生菜(番茄斑萎病毒-生菜分离株,TSWV-Let)、辣椒(番茄斑萎病毒-辣椒分离株,TSWV-Pep)和番茄(番茄斑萎病毒-番茄分离株,TSWV-Tom)中分离并比较了三种番茄斑萎病毒(TSWV)分离株,以确定它们感染来自七个科的18种鉴别植物的能力。在温室条件下,TSWV-Let是一种具有侵袭性的分离株,能够感染高达52%的鉴别植物,包括玉米。这三种分离株的核苷酸(nt)序列在M和S RNA片段中相似度超过90%。在TSWV-Let分离株的M片段中,我们在其基因间隔区(IGR)检测到nt变化,在Gc基因中,检测到一个包含重组位点的区域,以及与三个正选择位点之一相关的共衍征,其中一个氨基酸残基发生了变化(从半胱氨酸突变为缬氨酸)。我们推测Gc基因中的这些特征与宿主选择、适应性、侵袭性以及感染玉米植株的能力之间的关联。

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