Ramin Kelly I, Allison Steven D
Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA, United States.
Department of Earth System Science, University of California, Irvine, Irvine, CA, United States.
Front Microbiol. 2019 Dec 20;10:2956. doi: 10.3389/fmicb.2019.02956. eCollection 2019.
Like larger organisms, bacteria possess traits, or phenotypic characteristics, that influence growth and impact ecosystem processes. Still, it remains unclear how these traits are organized across bacterial lineages. Using 49 bacterial strains isolated from leaf litter in Southern California, we tested the hypothesis that bacterial growth rates trade off against extracellular enzyme investment. We also tested for phylogenetic conservation of these traits under high and low resource conditions represented, respectively, by Luria broth (LB) and a monomer-dominated medium extracted from plant litter. In support of our hypotheses, we found a negative correlation between the maximum growth rate and the total activity of carbon-, nitrogen-, and phosphorus-degrading extracellular enzymes. However, this tradeoff was only observed under high resource conditions. We also found significant phylogenetic signal in maximum growth rate and extracellular enzyme investment under high and low resource conditions. Driven by our bacterial trait data, we proposed three potential life history strategies. strategists invest heavily in extracellular enzyme production. strategists invest in high growth rates. Bacteria in a third category showed lower potential for enzyme production and growth, so we tentatively classified them as strategists that may perform better under conditions we did not measure. These strategies were related to bacterial phylogeny, with most growth strategists belonging to the phylum Proteobacteria and most maintenance and resource acquisition strategists belonging to the phylum Actinobacteria. By accounting for extracellular enzyme investment, our proposed life history strategies complement existing frameworks, such as the copiotroph-oligotroph continuum and Grime's competitor-stress tolerator-ruderal triangle. Our results have biogeochemical implications because allocation to extracellular enzymes versus growth or stress tolerance can determine the fate and form of organic matter cycling through surface soil.
与大型生物一样,细菌具有影响生长并影响生态系统过程的特征或表型特征。然而,这些特征在细菌谱系中是如何组织的仍不清楚。我们使用从南加州落叶层分离出的49种细菌菌株,检验了细菌生长速率与胞外酶投入之间存在权衡的假设。我们还分别在以鲁里亚肉汤(LB)和从植物凋落物中提取的以单体为主的培养基所代表的高资源和低资源条件下,测试了这些特征的系统发育保守性。为支持我们的假设,我们发现最大生长速率与碳、氮和磷降解胞外酶的总活性之间呈负相关。然而,这种权衡仅在高资源条件下观察到。我们还发现在高资源和低资源条件下,最大生长速率和胞外酶投入存在显著的系统发育信号。受我们的细菌特征数据驱动,我们提出了三种潜在的生活史策略。一类策略者在胞外酶产生方面投入巨大。二类策略者在高生长速率方面投入较多。第三类细菌的酶产生和生长潜力较低,因此我们暂时将它们归类为三类策略者,它们可能在我们未测量的条件下表现更好。这些策略与细菌系统发育有关,大多数生长策略者属于变形菌门,大多数维持和资源获取策略者属于放线菌门。通过考虑胞外酶投入,我们提出的生活史策略补充了现有的框架,如富养菌 - 贫养菌连续体和格兰姆的竞争者 - 胁迫耐受者 - 杂草型三角形。我们的结果具有生物地球化学意义,因为分配给胞外酶与生长或胁迫耐受性的比例可以决定通过表层土壤的有机物质循环的命运和形式。