接种了……的烟草的RNA测序数据

RNA sequencing data of tobacco inoculated with .

作者信息

Yan Gengxuan, Yang Hongyi

机构信息

Key Laboratory of Saline-alkali Vegetation Ecology Restoration (Northeast Forestry University), Ministry of Education, Harbin 150040, China.

College of Life Sciences, Northeast Forestry University, Harbin 150040, China.

出版信息

Data Brief. 2020 Jan 3;29:105106. doi: 10.1016/j.dib.2019.105106. eCollection 2020 Apr.

DOI:10.1016/j.dib.2019.105106

PMID:31993465

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6971375/

Abstract

(ASPV) mainly infects apple, pear and their closely related species in the world. ASPV causes some symptoms like leaf etiolation and stony pit in cultivated pear, but produces few symptoms in cultivated apple. We inoculated tobacco with ASPV, which originates from Nanking cherry (), and we obtained tobacco RNA-sequencing data through high-throughput sequencing. In total, 17,401,736 clean reads were obtained after sequencing and removing adaptor sequences, contamination and low-quality reads. An RNA-seq data has been uploaded to Sequence Read Archive (SRA), which enables researchers to access the RNA-sequencing data of tobacco inoculated with ASPV.

摘要

苹果茎痘病毒（ASPV）在世界范围内主要感染苹果、梨及其近缘种。ASPV在栽培梨上会引起叶片黄化和石痘等症状，但在栽培苹果上产生的症状较少。我们用源自毛樱桃的ASPV接种烟草，并通过高通量测序获得了烟草RNA测序数据。测序并去除接头序列、污染和低质量 reads 后，共获得了17,401,736条clean reads。一份RNA-seq数据已上传至序列读取存档库（SRA），这使研究人员能够获取接种ASPV的烟草的RNA测序数据。