Yamazaki Tomohiro, Nakagawa Shinichi, Hirose Tetsuro
Institute for Genetic Medicine, Hokkaido University, Sapporo, 060-0815 Japan.
Faculty of Pharmaceutical Sciences, Hokkaido University, Sapporo, 060-0812 Japan.
Cold Spring Harb Symp Quant Biol. 2019;84:227-237. doi: 10.1101/sqb.2019.84.039404. Epub 2020 Feb 4.
Long noncoding RNAs (lncRNAs) are fundamental regulators of various cellular processes. A subset of lncRNAs, termed architectural RNAs (arcRNAs), function in the formation and maintenance of phase-separated membraneless organelles in multiple eukaryotic species. These membraneless organelles represent an important type of compartmentalization in the crowded cellular environment and have several distinct features. The NEAT1_2 lncRNA is a well-characterized arcRNA that functions as an essential scaffold of paraspeckle nuclear bodies. Here, we describe the biogenesis of paraspeckles on arcRNAs through phase separation, focusing on the specific functions of multiple NEAT1_2 RNA domains and their partner RNA-binding proteins. Finally, we present an updated model of paraspeckle formation and discuss future perspectives of research into arcRNA-instructed architectures of phase-separated nuclear bodies.
长链非编码RNA(lncRNAs)是各种细胞过程的基本调节因子。一部分lncRNAs,称为结构RNA(arcRNAs),在多个真核生物物种中参与相分离无膜细胞器的形成和维持。这些无膜细胞器是拥挤细胞环境中一种重要的区室化类型,具有几个明显的特征。NEAT1_2 lncRNA是一种特征明确的arcRNA,作为旁斑核小体的重要支架发挥作用。在这里,我们描述了通过相分离在arcRNAs上形成旁斑的过程,重点关注多个NEAT1_2 RNA结构域及其伴侣RNA结合蛋白的特定功能。最后,我们提出了一个更新的旁斑形成模型,并讨论了关于arcRNA指导的相分离核小体结构研究的未来前景。