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海洋甲藻水华期间附着微生物的功能特征。

Functional profiles of phycospheric microorganisms during a marine dinoflagellate bloom.

机构信息

Shenzhen Public Platform for Screening and Application of Marine Microbial Resources, The Shenzhen International Graduate School, Tsinghua University, Shenzhen, China; The Shenzhen International Graduate School, Tsinghua University, Shenzhen, China.

The School of Environment and Energy, Graduate School at Shenzhen, Peking University, Guangdong Province, Shenzhen, China.

出版信息

Water Res. 2020 Apr 15;173:115554. doi: 10.1016/j.watres.2020.115554. Epub 2020 Jan 28.

Abstract

Harmful algal blooms (HABs) are an ecological concern but relatively few studies have investigated the functional potential of bacterioplankton over a complete algal bloom cycle, which is critical for determining their contribution to the fate of algal blooms. To address this point, we carried out a time-series metagenomic analysis of the functional features of microbial communities at three different Gymnodinium catenatum bloom stages (pre-, peak-, and post-bloom). Different microbial composition were observed during the blooming stages. The environmental parameters and correlation networks co-contribute to microbial variability, and the former explained 38.4% of total variations of the bacterioplankton community composition. Functionally, a range of pathways involved in carbon, nitrogen, phosphorus and sulfur cycling were significantly different during the various HAB stages. Genes associated with carbohydrate-active enzymes, denitrification, and iron oxidation were enriched at the pre-bloom stage; genes involved in reductive citrate cycle for carbon fixation, carbon degradation, nitrification and phosphate transport were enhanced at the peak stage; and relative gene abundance related to sulfur oxidation, vitamin synthesis, and iron transport and storage was increased at the post-bloom stage. The ecological linkage analysis has shown that microbial functional potential especially the C/P/Fe metabolism were significantly linked to the fate of the algal blooms. Taken together, our results demonstrated that microorganisms displayed successional patterns not only at the community level, but also in the metabolic potential on HAB's progression. This work contributes to a growing understanding of microbial structural elasticity and functional plasticity and shed light on the potential mechanisms of microbial-mediated HAB trajectory.

摘要

有害藻华 (HABs) 是一个生态关注点,但相对较少的研究调查了细菌浮游生物在完整的藻华周期中的功能潜力,这对于确定它们对藻华命运的贡献至关重要。为了解决这一问题,我们对三种不同的夜光藻(Gymnodinium catenatum)藻华阶段(前、峰和后)的微生物群落的功能特征进行了时间序列宏基因组分析。在藻华阶段观察到不同的微生物组成。环境参数和相关网络共同影响微生物的变异性,前者解释了细菌浮游生物群落组成总变化的 38.4%。在功能上,涉及碳、氮、磷和硫循环的一系列途径在不同的 HAB 阶段显著不同。与碳水化合物活性酶、反硝化和铁氧化相关的基因在前藻华阶段富集;与碳固定、碳降解、硝化和磷酸盐转运相关的基因在藻华高峰期增强;与硫氧化、维生素合成以及铁运输和储存相关的相对基因丰度在后藻华阶段增加。生态关联分析表明,微生物的功能潜力,特别是 C/P/Fe 代谢,与藻华的命运显著相关。总之,我们的研究结果表明,微生物不仅在群落水平上,而且在藻华进展过程中的代谢潜力上,都表现出了演替模式。这项工作有助于加深对微生物结构弹性和功能可塑性的认识,并为微生物介导的 HAB 轨迹的潜在机制提供了线索。

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